Pairwise Alignments

Query, 358 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 66/290 (22%), Positives = 122/290 (42%), Gaps = 19/290 (6%)

Query: 46  EGKYKKDAPWVIGMSSFGVNANTWTVQVAHEAQAAADNDKRITKFILLDAGFDQKKQVAD 105
           +GK  K    V G+   G     W V+   E  A  D   ++T F   D  +D   Q   
Sbjct: 25  DGKTYKVGAAVYGLK--GQFMQNW-VRELKEHPAVKDGTVQLTVF---DGNYDALTQNNQ 78

Query: 106 IEDLIAQKVDAIIVQPVTSTSANASIEKAVAAGIPVVLHTGRIESEAYTTEIQGGAEHFG 165
           IE+++ Q+ DAI+  P+ + +   +++ A++  + V+    ++ ++A    +       G
Sbjct: 79  IENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVVIASNTKV-ADASVPYVGNDDVEGG 137

Query: 166 KVMGDFLVKELGGKGNIWVLRGLAGHPEDTNRYNGLKQSL-EGTEIKIAAEEHGDWQYDK 224
           ++    +V +L GKGN+ +++G  G     +R  G  + L +  +IKI  ++  +W   +
Sbjct: 138 RLQAQAMVDKLNGKGNVVIIQGPIGQSAQIDREKGELEVLGKHPDIKIIEKKTANWDRAQ 197

Query: 225 AKKVCETLYLSDP-NVDGIWSSGADMTRACVDVFKQFG---SPIPPISGEGNNGFFGQWI 280
           A  + E    + P  ++G+ +   DM    V   K  G     +P  S +G         
Sbjct: 198 ALALTEDWLNAHPKGINGVIAQNDDMALGAVQALKSHGLTSKDVPVTSIDGMPDAIQAAK 257

Query: 281 ADGFKSISSEYSPAQGAAGIRAAVALLEGKALHKHYDYNPPGWDLEKVKK 330
            D   +   + + AQ    +  A+  L GK      DY P     E+  K
Sbjct: 258 KDEVTTFLQD-AQAQSQGALDVALRALAGK------DYKPQSVIWERYAK 300