Pairwise Alignments

Query, 358 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 386 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

 Score =  106 bits (265), Expect = 9e-28
 Identities = 82/298 (27%), Positives = 132/298 (44%), Gaps = 6/298 (2%)

Query: 43  TVEEGKYKKDAPWVIGMSSFGVNANTWTVQVAHEAQAAADNDKRITK-FILLDAGFDQKK 101
           TV+  KY+K  P+ +  S+  V  N W V   +  QA  + +K   K F   DA    +K
Sbjct: 67  TVDTAKYRKKGPYTLCFSNASVG-NPWRVVGWNTMQAEVELNKADIKGFEYADAQGKDEK 125

Query: 102 QVADIEDLI-AQKVDAIIVQPVTSTSANASIEKAVAAGIPVVLHTGRIESEAYTTEIQG- 159
           Q++DI  L+ + K DA+IV P TS +   ++E+A    +PVV     ++S    T ++  
Sbjct: 126 QISDIRSLVNSGKCDALIVSPNTSAALTPAVEEACKK-LPVVTFDRSVDSLCPVTAVRSI 184

Query: 160 GAEHFGKVMGDFLVKELGGKGNIWVLRGLAGHPEDTNRYNGLKQSLEGTEIKIAAEEHGD 219
           G   +GKV  DF+       G + VLR   G      R+   K+  + + +K+   E   
Sbjct: 185 GGYAWGKVGADFIAANAPKGGKVLVLRTAPGVDLFETRWAAAKKVFDASGLKVVGNEFVG 244

Query: 220 WQYDKAKKVCETLYLSDPNVDGIWSSGADMTRACVDVFKQFGSPIPPISGEGNNGFFGQW 279
               K K            +D +W     ++ A  + F+  G P P I+GE    +   W
Sbjct: 245 GDRAKTKATVADYLSRSGKIDAVWVDLGAVSVAVAEAFEDAGQPYPIITGEDQQDYLQAW 304

Query: 280 IADGFKSISSEYSPAQGAAGIRAAVALLEGKALHKHYDYNP-PGWDLEKVKKYYRDDL 336
             +GFK I+  Y   Q    + AA+  L+G+ L       P P    +++ +Y  D L
Sbjct: 305 KKNGFKGIAPTYPAYQWRTAVIAALKALKGEPLPSPTWILPQPSITAKELPQYVNDKL 362