Pairwise Alignments

Query, 358 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 320 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

 Score = 77.4 bits (189), Expect = 5e-19
 Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 9/202 (4%)

Query: 61  SFGVNANTWTVQVAHEAQAAADNDKRITKFILLDAGFDQKKQVADIEDL-IAQKVDAIIV 119
           SF    N W    A++A+   + + +  K  +  A  +  +Q   ++DL    K++A++V
Sbjct: 41  SFMGGINYW----ANQAKKDLEKEHKDLKITIKTAA-NAPEQANQLQDLSTVTKINALVV 95

Query: 120 QPVTSTSANASIEKAVAAGIPV-VLHTGRIESEAYTTEIQGGAEHFGKVMGDFLVKELGG 178
            P  S +    + +  A G  V V+  G  ++ A    + G    FGK+  +++VK+L G
Sbjct: 96  FPFESAALTKPVAQVKAKGAYVTVVDRGLTDTSAQDAYVAGDNTAFGKIPAEYIVKQLNG 155

Query: 179 KGNIWVLRGLAGHPEDTNRYNGLKQSLEGT-EIKIAAEEHGDWQYDKAKKVCETLYLSDP 237
           KGN+  LRG+A    D  R +     L+G+ +IK+   ++ +W  D A KV +       
Sbjct: 156 KGNVVALRGIA-TTLDNERMDAFNAVLKGSPDIKLLDAKYANWNRDDAFKVTQDYLTRFK 214

Query: 238 NVDGIWSSGADMTRACVDVFKQ 259
           N+D IW++  DM    +    Q
Sbjct: 215 NIDAIWAADDDMAVGVLKAISQ 236