Pairwise Alignments

Query, 358 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 318 a.a., Ribose import binding protein RbsB from Pseudomonas sp. DMC3

 Score = 77.0 bits (188), Expect = 6e-19
 Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 8/221 (3%)

Query: 98  DQKKQVADIEDLIAQKVDAIIVQPVTSTSANASIEKAVAAGIPVV-----LHTGRIESEA 152
           D   Q   +E +I  KV+A+++ P  S +    I+KAV AGI V+     L    ++S+ 
Sbjct: 79  DTAGQTRIVEQMILAKVNALVIAPSDSKAMVPVIKKAVDAGITVINIDNQLDPAVVKSKN 138

Query: 153 YTTEIQGGAEHFG-KVMGDFLVKELGGKGNIWVLRGLAGHPEDTNRYNGLKQSLEGTEIK 211
                 G     G +++G++L K+L     + ++ G++       R  G K ++E  +IK
Sbjct: 139 INVPFVGPDNRKGARLVGEYLAKQLKAGDEVGIIEGVSTTTNAQARTAGFKDAMEAAQIK 198

Query: 212 IAAEEHGDWQYDKAKKVCETLYLSDPNVDGIWSSGADMTRACVDVFKQFG-SPIPPISGE 270
           + + + GDW+ DK  KV  ++    P+V  + +    M    V   +  G +    + G 
Sbjct: 199 VVSLQSGDWEIDKGNKVAASILSEYPDVKALLAGNDSMAVGAVSAVRAAGKAGQVKVVGY 258

Query: 271 GNNGFFGQWIADG-FKSISSEYSPAQGAAGIRAAVALLEGK 310
            N       + DG   + + +++  Q   GI  A+ +++G+
Sbjct: 259 DNINAIKPMLKDGRVLATADQFAAKQAVFGIETALKIIKGE 299