Pairwise Alignments

Query, 358 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 309 a.a., ribose ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 9/229 (3%)

Query: 93  LDAGFDQKKQVADIEDLIAQKVDAIIVQPVTSTSANASIEKAVAAGIPVVLHTGRIESEA 152
           L   FD +  V  I   IA+K   II+ P+   +    + KA AAGIPV L    +   A
Sbjct: 58  LSQNFDVQTGVQQINTCIARKAAGIILWPLDPQAYIPGLAKAKAAGIPVNLINSPMNDAA 117

Query: 153 --YTTEIQGGAEHF-GKVMGDFLVKELGGKGNIWVLRGLAGHPEDTNRYNGLKQSLE--G 207
             + T   G   +  G++  + L K L GKG+I ++ G AG+     R +G    L+  G
Sbjct: 118 KPFVTSFTGPDVYSEGEMAAEALQKALDGKGSIVIIAGQAGNGTTIGRVDGFNAKLKALG 177

Query: 208 TEIKIAAEEHGDWQYDKAKKVCETLYLS-DPNVDGIWSSGADMTRACVDVFKQ--FGSPI 264
           ++I++    + D+   KA      L       + G++++   M R  +D +K+   G   
Sbjct: 178 SKIEVLDTVNADFDQQKALVASRDLITRFGDKIAGVYANDDTMARGFIDAWKEAKSGKAT 237

Query: 265 PPISGEGNNGFFGQWIADGFKSISSEYSPAQ-GAAGIRAAVALLEGKAL 312
           PPI G        + I +G    +   SP + G   I A   +L GK +
Sbjct: 238 PPIVGINGQKDAFESIRNGEMYATIVQSPIEDGLLAINAMADVLNGKKI 286