Pairwise Alignments

Query, 497 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 499 a.a., L-arabinose transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  334 bits (857), Expect = 4e-96
 Identities = 192/490 (39%), Positives = 286/490 (58%), Gaps = 10/490 (2%)

Query: 10  ISKAFGGSVALRDVSLALAPGTVHALMGENGAGKSTLMKILAGVHQPDSGEVRRAGRTVS 69
           I K F G  AL  +S    P  VHALMGENGAGKSTL+KIL G + P SG ++   +T+ 
Sbjct: 11  IGKEFPGVKALSQISFEARPREVHALMGENGAGKSTLLKILGGAYLPSSGTLQIGEQTMD 70

Query: 70  FANPRAALEAGISTVFQELSLLPNMTIAENMFLGREPTGCFGGIDRRRMRVGTKDALARL 129
           F +   ++  G++ + QEL L+P MT+AEN+FLG  PT  FG ++R ++R      L  L
Sbjct: 71  FKSAADSIACGVAVIHQELHLVPEMTVAENLFLGHLPTR-FGVVNRSQLRKQALACLKGL 129

Query: 130 GLTLDPDTLVSELSIAERQFVEIAHGIDSDADVFILDEPTAALNAADVEVLNRHIRSLRE 189
              +DPD  +  LS+ +RQ VEIA  +   A V   DEPT++L+A +++ L   I  LR+
Sbjct: 130 ADEIDPDEKLGRLSLGQRQLVEIAKALSRGAHVIAFDEPTSSLSAREIDRLMAIITRLRD 189

Query: 190 AGKAIVYISHRMDEIFAICDVVTVLKDGQLVGT-RPLSEMTPASLIAMMVGRELEDLFPE 248
            GK ++Y+SHRM+E+F IC+ VTV KDG+ V T   ++ ++   L+  MVGR+++D++  
Sbjct: 190 EGKVVLYVSHRMEEVFRICNAVTVFKDGRYVRTFDDMNALSHDQLVTCMVGRDIQDIYDY 249

Query: 249 RGQGEGAAALSVSGLRLHTDSQPFSFTVRKGEIVGFAGLEGQGQQKAVRALVGQFAPVEG 308
           R + +G  AL V GL      +P S  V KGEI+G  GL G G+ +  R L G      G
Sbjct: 250 RQREQGEVALKVEGLLGPGLREPVSLNVHKGEILGLFGLVGAGRTELFRLLSGLTRSTAG 309

Query: 309 TASRRGETIQLPVPKESGVRRWQALGGAFVPEDRKDEGLFLGHSVGQNIVAALHAGRPTL 368
           + +  G+T+QL  P+++      A G    PEDRK EG+    SV +NI  +      T 
Sbjct: 310 SLALCGQTLQLRSPRDA-----IAAGVLLCPEDRKKEGIIPLSSVAENINISARGAHSTF 364

Query: 369 KAAKRYGDVITETMRR---LNIKASGPSAIVGALSGGNQQKVLLGRYLATDADLLLIEEP 425
               R G   T   R+   + +K       +  LSGGNQQK +LGR+L+    +LL++EP
Sbjct: 365 GWLLRDGWETTNADRQIKAMKVKTPNAEQKIMYLSGGNQQKAILGRWLSMPMKVLLLDEP 424

Query: 426 TRGVDVGAKAEIYRILRDFAKAGGAVLVLSRETIELIGLCERLYVIHGNTAVSEIRAVDA 485
           TRG+D+GAK+EIY+I+ + A +G AV+V+S + +E++G+ +R+ V+       E+    A
Sbjct: 425 TRGIDIGAKSEIYQIIHNLAASGIAVIVVSSDLMEVMGISDRILVMSEGALTGELTRDQA 484

Query: 486 TEHSILNAAL 495
            E  +L  AL
Sbjct: 485 DEARLLQLAL 494



 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 6/224 (2%)

Query: 23  VSLALAPGTVHALMGENGAGKSTLMKILAGVHQPDSGEVRRAGRTVSFANPRAALEAGIS 82
           VSL +  G +  L G  GAG++ L ++L+G+ +  +G +   G+T+   +PR A+ AG+ 
Sbjct: 273 VSLNVHKGEILGLFGLVGAGRTELFRLLSGLTRSTAGSLALCGQTLQLRSPRDAIAAGVL 332

Query: 83  TVFQELS---LLPNMTIAENMFLG-REPTGCFGGIDRRRMRVGTKDALARLGLTLDPDT- 137
              ++     ++P  ++AEN+ +  R     FG + R        D   +      P+  
Sbjct: 333 LCPEDRKKEGIIPLSSVAENINISARGAHSTFGWLLRDGWETTNADRQIKAMKVKTPNAE 392

Query: 138 -LVSELSIAERQFVEIAHGIDSDADVFILDEPTAALNAADVEVLNRHIRSLREAGKAIVY 196
             +  LS   +Q   +   +     V +LDEPT  ++      + + I +L  +G A++ 
Sbjct: 393 QKIMYLSGGNQQKAILGRWLSMPMKVLLLDEPTRGIDIGAKSEIYQIIHNLAASGIAVIV 452

Query: 197 ISHRMDEIFAICDVVTVLKDGQLVGTRPLSEMTPASLIAMMVGR 240
           +S  + E+  I D + V+ +G L G     +   A L+ + + R
Sbjct: 453 VSSDLMEVMGISDRILVMSEGALTGELTRDQADEARLLQLALPR 496