Pairwise Alignments

Query, 497 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 507 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

 Score =  334 bits (856), Expect = 5e-96
 Identities = 205/504 (40%), Positives = 281/504 (55%), Gaps = 20/504 (3%)

Query: 1   MSHLIEMAAISKAFGGSVALRDVSLALAPGTVHALMGENGAGKSTLMKILAGVHQPDSGE 60
           +S L+E+  ISK FG S AL  V   L  G +HAL GENGAGKSTLM I+ G+HQPD GE
Sbjct: 4   VSALLELKGISKRFGASRALTGVDFTLHAGEIHALCGENGAGKSTLMNIIDGIHQPDEGE 63

Query: 61  VRRAGRTVSFANPRAALEAGISTVFQELSLLPNMTIAENMFLGREPTGCFGGIDRRRMRV 120
               GR V    P  A+  GI  V QE++L  + T+AEN+F+     G    ++   +  
Sbjct: 64  TSLDGRKVVIDGPAHAMRLGIGLVHQEIALCGDATVAENIFMPEINAGKHAWMNYASLNE 123

Query: 121 GTKDALARLGLTLDPDTLVSELSIAERQFVEIAHGIDSDADVFILDEPTAALNAADVEVL 180
                L RLG  +DP  LV +LSI+ +Q +EIA  +  D  V ILDEPTAAL   +   L
Sbjct: 124 RAARVLQRLGQDVDPAALVKDLSISTQQLIEIAKALTLDCKVLILDEPTAALTDNESAAL 183

Query: 181 NRHIRSLREAGKAIVYISHRMDEIFAICDVVTVLKDGQLVGTRPLSEMTPASLIAMMVGR 240
            + +  L+  G  I+YISHRM EIFA C  VTVL+DG+ V   PL+E+   +L+  MVGR
Sbjct: 184 FKVLHDLKAQGIGIIYISHRMAEIFAHCSRVTVLRDGRNVHCGPLAELDADALVRRMVGR 243

Query: 241 ELEDLFPER--GQGEGAAALSVSGLRLHTDSQPFSFTVRKGEIVGFAGLEGQGQQKAVRA 298
           +L + +P +      G   L VS +         SFT+R+GEI+G AGL G G+ +    
Sbjct: 244 DLGNYYPPKHGDAAHGEPVLEVSDIADGERVHGVSFTLRRGEILGIAGLMGAGRSELAET 303

Query: 299 LVGQFAPVEGTASRRGETIQLPVPKESGVRRWQALGGAFVPEDRKDEGLFLGHSVGQNIV 358
           + G      G    RG T  L + K S   R    G A++ EDRK  G++L   + QNI 
Sbjct: 304 VCGLRTATRGAVRLRGRT--LAIRKYSDALR---EGIAYLSEDRKAAGVYLDLPIAQNI- 357

Query: 359 AALHAGRPTLKAAKRYGDVITETMR--------RLNIKASGPSAIVGALSGGNQQKVLLG 410
               A     + + R+G +     R        +L +K+ G    V +LSGGNQQKV + 
Sbjct: 358 ----ASMALRRVSSRFGLLQRAAERKLALDLGGKLKLKSDGVDIDVASLSGGNQQKVAIA 413

Query: 411 RYLATDADLLLIEEPTRGVDVGAKAEIYRILRDFAKAGGAVLVLSRETIELIGLCERLYV 470
           + LAT+  +LL++EPTRGVDVGAK+EI+ ILR+ A  G  V+V+S E  E+IGLC+R  V
Sbjct: 414 KLLATNPSVLLMDEPTRGVDVGAKSEIHHILRELASQGVGVVVISSELPEIIGLCDRALV 473

Query: 471 IHGNTAVSEIRAVDATEHSILNAA 494
           I       E++  + TE ++L  A
Sbjct: 474 IRDGRLAGEVQDNEMTEEALLRLA 497



 Score = 88.2 bits (217), Expect = 6e-22
 Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 6/223 (2%)

Query: 23  VSLALAPGTVHALMGENGAGKSTLMKILAGVHQPDSGEVRRAGRTVSFANPRAALEAGIS 82
           VS  L  G +  + G  GAG+S L + + G+     G VR  GRT++      AL  GI+
Sbjct: 277 VSFTLRRGEILGIAGLMGAGRSELAETVCGLRTATRGAVRLRGRTLAIRKYSDALREGIA 336

Query: 83  TVFQE---LSLLPNMTIAENM--FLGREPTGCFGGIDRRRMRVGTKDALARLGLTLDP-D 136
            + ++     +  ++ IA+N+     R  +  FG + R   R    D   +L L  D  D
Sbjct: 337 YLSEDRKAAGVYLDLPIAQNIASMALRRVSSRFGLLQRAAERKLALDLGGKLKLKSDGVD 396

Query: 137 TLVSELSIAERQFVEIAHGIDSDADVFILDEPTAALNAADVEVLNRHIRSLREAGKAIVY 196
             V+ LS   +Q V IA  + ++  V ++DEPT  ++      ++  +R L   G  +V 
Sbjct: 397 IDVASLSGGNQQKVAIAKLLATNPSVLLMDEPTRGVDVGAKSEIHHILRELASQGVGVVV 456

Query: 197 ISHRMDEIFAICDVVTVLKDGQLVGTRPLSEMTPASLIAMMVG 239
           IS  + EI  +CD   V++DG+L G    +EMT  +L+ +  G
Sbjct: 457 ISSELPEIIGLCDRALVIRDGRLAGEVQDNEMTEEALLRLASG 499