Pairwise Alignments

Query, 497 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 501 a.a., Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  351 bits (900), Expect = e-101
 Identities = 207/500 (41%), Positives = 295/500 (59%), Gaps = 13/500 (2%)

Query: 1   MSHLIEMAAISKAFGGSVALRDVSLALAPGTVHALMGENGAGKSTLMKILAGVHQPDSGE 60
           M  L+++  I KAF G  AL   +L + PG V AL+GENGAGKST+MK+L G++  D+G 
Sbjct: 1   MDALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGS 60

Query: 61  VRRAGRTVSFANPRAALEAGISTVFQELSLLPNMTIAENMFLGREPTGCFGGIDRRRMRV 120
           +   G+  +F  P+++ EAGI  + QEL+L+P +TIAEN+FLGRE    FG ID ++M  
Sbjct: 61  LLWLGKETTFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKKMYA 120

Query: 121 GTKDALARLGLTLDPDTLVSELSIAERQFVEIAHGIDSDADVFILDEPTAALNAADVEVL 180
                LA+L L    D LV ELSI ++Q VEIA  +  ++ V I+DEPT AL   + + L
Sbjct: 121 EADHLLAKLNLRFKSDKLVGELSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETDSL 180

Query: 181 NRHIRSLREAGKAIVYISHRMDEIFAICDVVTVLKDGQLVGTRPLSEMTPASLIAMMVGR 240
            R IR L+  G+ IVYISHRM EIF ICD VTV +DGQ +  R ++ +T  SLI MMVGR
Sbjct: 181 FRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVATLTEDSLIEMMVGR 240

Query: 241 ELEDLFPERGQGEGAAALSVSGLRLHTDSQPFSFTVRKGEIVGFAGLEGQGQQKAVRALV 300
           +LED +P      G   L V  L         SF +RKGEI+G +GL G G+ + ++ L 
Sbjct: 241 KLEDQYPHLDNAPGEIRLKVDNL-CGPGVNDVSFVLRKGEILGISGLMGAGRTELMKVLY 299

Query: 301 GQFAPVEGTASRRGETIQLPVPKESGVRRWQALGGAFVPEDRKDEGLFLGHSVGQNI-VA 359
           G      G  +  G  +    P++       A G  ++ EDRK +GL LG SV +N+ + 
Sbjct: 300 GAMPRTSGYVTLDGHEVVTRSPQDG-----LANGIVYISEDRKRDGLVLGMSVKENMSLT 354

Query: 360 AL----HAGRPTLKAAKRYGDVITETMRRLNIKASGPSAIVGALSGGNQQKVLLGRYLAT 415
           AL     AG  +LK  K     + + +R  N+K       +G LSGGNQQKV + R L T
Sbjct: 355 ALDYFSRAG-GSLK-HKDEQQAVGDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMT 412

Query: 416 DADLLLIEEPTRGVDVGAKAEIYRILRDFAKAGGAVLVLSRETIELIGLCERLYVIHGNT 475
              +L+++EPTRGVDVGAK EIY+++  F   G +++++S E  E++G+ +R+ V+H   
Sbjct: 413 RPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGH 472

Query: 476 AVSEIRAVDATEHSILNAAL 495
              E     AT+  ++ AA+
Sbjct: 473 LSGEFTREQATQEVLMAAAV 492



 Score = 79.3 bits (194), Expect = 3e-19
 Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 6/227 (2%)

Query: 20  LRDVSLALAPGTVHALMGENGAGKSTLMKILAGVHQPDSGEVRRAGRTVSFANPRAALEA 79
           + DVS  L  G +  + G  GAG++ LMK+L G     SG V   G  V   +P+  L  
Sbjct: 268 VNDVSFVLRKGEILGISGLMGAGRTELMKVLYGAMPRTSGYVTLDGHEVVTRSPQDGLAN 327

Query: 80  GISTVFQELS---LLPNMTIAENMFLGREP--TGCFGGIDRRRMRVGTKDALARLGL-TL 133
           GI  + ++     L+  M++ ENM L      +   G +  +  +    D +    + T 
Sbjct: 328 GIVYISEDRKRDGLVLGMSVKENMSLTALDYFSRAGGSLKHKDEQQAVGDFIRLFNVKTP 387

Query: 134 DPDTLVSELSIAERQFVEIAHGIDSDADVFILDEPTAALNAADVEVLNRHIRSLREAGKA 193
             +  +  LS   +Q V IA G+ +   V ILDEPT  ++    + + + I   +  G +
Sbjct: 388 SMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLS 447

Query: 194 IVYISHRMDEIFAICDVVTVLKDGQLVGTRPLSEMTPASLIAMMVGR 240
           I+ +S  M E+  + D + V+ +G L G     + T   L+A  VG+
Sbjct: 448 IILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQEVLMAAAVGK 494