Pairwise Alignments

Query, 323 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 321 a.a., Ribose import permease protein RbsC from Xanthobacter sp. DMC5

 Score =  144 bits (362), Expect = 4e-39
 Identities = 93/306 (30%), Positives = 158/306 (51%), Gaps = 26/306 (8%)

Query: 27  VIAIAMALWLAATTSQFGQSSNLANLVAQGMPLLITAVGQMFVVLVGGLDLSIGSVVSFT 86
           V  + +++  A  +  F  + NL+N++ Q + LL+ A+    +++  GLDLS+G+V++  
Sbjct: 25  VALVGLSVLFAVASPGFLTAGNLSNILVQSVILLLLALPMTLIIMTEGLDLSMGAVLTLA 84

Query: 87  TAILALDLPGFVTIPAVFVLAGLIGA---------TNGYCVTRLSVHPIVATLSMQYIVL 137
           + +LAL     + +    ++ GL GA         TNG+ V  L + P VATL       
Sbjct: 85  SLVLAL-----IVVATQSLMLGLAGALCVGLAFGLTNGWLVASLGIPPFVATLGTLGAAQ 139

Query: 138 GITRVLRPVSGG----AVPDSVRWMVEGSLFGIPLPVFWGIVTMLVAWKLLYGSRYGLHL 193
           G+  +   VS G     +P  VR +  G + GIP P+  G     +   LLY +R+G ++
Sbjct: 140 GLALI---VSDGQSVVGIPRFVRLVYSGEVAGIPNPILIGAGFYALFHVLLYHTRFGTYI 196

Query: 194 FAIGGGVASGSADAARNFGIPANRNILLAYVICTLFAALAGVFLAGRIVSGDPNVGLLME 253
            A+GG     + +A    G+   R ++  Y++    A +A + +  R+ +G P   + ME
Sbjct: 197 CALGG-----NREALTLAGVKWKRLLISVYMLGGAMAGVAALLMTARMNAGHPTAAIGME 251

Query: 254 LDAITAVAIGGTQLSGGVGSLHGTVIGVAALALLSNGMNLLNVTPFVQTAIKGILLMAVV 313
            DAI AVA+GGT    G G + GT++GV  + +L NG+NL+ V   VQ A  G+L++  +
Sbjct: 252 FDAIAAVALGGTSFEKGNGWIFGTLMGVLTVGVLRNGLNLMAVPSSVQVACIGVLVIFAL 311

Query: 314 ALQSRK 319
            L   +
Sbjct: 312 FLDGMR 317