Pairwise Alignments

Query, 323 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 321 a.a., arabinose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  137 bits (345), Expect = 4e-37
 Identities = 88/282 (31%), Positives = 144/282 (51%), Gaps = 15/282 (5%)

Query: 49  LANLVAQGMPLLITAVG-----QMFVVLVGGLDLSIGSVVS---FTTAILALDLPGFVT- 99
           L+ L  +G+ L I+ VG      +F +  G  DLS+GSV++       I+  D    V  
Sbjct: 44  LSPLNMRGLGLAISTVGIAACTMLFCLASGHFDLSVGSVIACAGVVAGIVIRDTDSVVLG 103

Query: 100 IPAVFVLAGLIGATNGYCVTRLSVHPIVATLSMQYIVLGITRVLRPVSGGAVPDSVRWMV 159
           + A   +  ++G  NG  + +L ++ ++ATL+   IV G+  +        V D   ++ 
Sbjct: 104 VSAALAMGLVVGLINGIVIAKLRINALIATLATMQIVRGLAYIFSNGKAVGVMDEGFFVF 163

Query: 160 -EGSLFGIPLPVFWGIVTMLVAWKLLYGSRYGLHLFAIGGGVASGSADAARNFGIPANRN 218
             G L G+P+P+   ++  +    LL  + YG +  AIGG     + +AA   G+  +R 
Sbjct: 164 GNGQLLGVPVPIIITVLCFVFFGWLLNYTTYGRNTMAIGG-----NQEAALLAGVNVDRT 218

Query: 219 ILLAYVICTLFAALAGVFLAGRIVSGDPNVGLLMELDAITAVAIGGTQLSGGVGSLHGTV 278
            ++ + +  L  ALAGV LA R+ SG P +G   EL  I+A  +GG  LSGG+G +   +
Sbjct: 219 KIIIFAVHGLIGALAGVILASRMTSGQPMIGQGFELTVISACVLGGVSLSGGIGMIRHVI 278

Query: 279 IGVAALALLSNGMNLLNVTPFVQTAIKGILLMAVVALQSRKK 320
            GV  LA++ N MNL N+  F Q  I+G +L+  V +   K+
Sbjct: 279 AGVLILAIIENAMNLKNIDTFYQYVIRGSILLLAVIIDRMKQ 320