Pairwise Alignments

Query, 323 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  183 bits (464), Expect = 6e-51
 Identities = 115/304 (37%), Positives = 174/304 (57%), Gaps = 15/304 (4%)

Query: 25  PLVIAIAMALWLAATTSQFGQSSNLANLVAQGMPLLITAVGQMFVVLVGGLDLSIGSVVS 84
           P V  + + L +   +  F  +SNL+N+  Q     I AVG   V+L GG+DLS+G V++
Sbjct: 34  PFVGLVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMA 93

Query: 85  F----TTAILALDLPGFVTIPAVFVLAGLIGATNGYCVTRLSVHPIVATLSMQYIVLGIT 140
                T  ++   LP  + I A  ++    G  NG  V  L + PI+ TL+   I  G+ 
Sbjct: 94  LSGTLTAGLMVAGLPPGLAIGAGMLIGVAFGIGNGLFVAYLHMPPIIVTLATMGIARGLG 153

Query: 141 RVLR---PVSGGAVPDSVRWMVEGSLFGIPLPVFWGIVTMLVAWKLLYGSRYGLHLFAIG 197
            +     P+SG  +PD   +    SLFGI +P+   ++T LVA+ LL  +R G +++AIG
Sbjct: 154 LMYTDGYPISG--LPDWFAFFGRESLFGIQVPILIMLLTYLVAYVLLQHTRIGRYIYAIG 211

Query: 198 GGVASGSADAARNFGIPANRNILLAYVICTLFAALAGVFLAGRIVSGDPNVGLLMELDAI 257
           G     + +A R  G+ A R  LL Y I  L AA+AG+ L  R++SG PN G+  ELDAI
Sbjct: 212 G-----NEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAGVSFELDAI 266

Query: 258 TAVAIGGTQLSGGVGSLHGTVIGVAALALLSNGMNLLNVTPFVQTAIK-GILLMAVVALQ 316
            AV +GG  ++GG G + GT++G   L +L+NG+N+L V+P+VQ+ IK GI+L+A+   +
Sbjct: 267 AAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGIILLAIFISR 326

Query: 317 SRKK 320
            R K
Sbjct: 327 QRHK 330