Pairwise Alignments

Query, 323 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 321 a.a., KEGG: ribose transport system permease protein from Variovorax sp. SCN45

 Score =  148 bits (373), Expect = 2e-40
 Identities = 95/312 (30%), Positives = 165/312 (52%), Gaps = 17/312 (5%)

Query: 23  LLPLVIAIAMALWLAATTSQFGQSSNLA-----NLVAQGMPLLITAVGQMFVVLVGGLDL 77
           L+P+ +    A     T    GQ + L       L+ + + L + A+GQ FV+L G +DL
Sbjct: 12  LIPVTLVAVSACVYVGTALATGQHAQLTLAGVMGLLQRMIALGLVALGQNFVMLGGSIDL 71

Query: 78  SIGSVVSFTTAILALDLPGFV-----TIPAVFVLAGLIGATNGYCVTRLSVHPIVATLSM 132
           S+ +++S +  + +  + G        +  V ++A  +G  NG  + RL V P++ATL +
Sbjct: 72  SVANLISVSAVLASYFMQGDTGAIGHAVVGVLLVAAAVGTVNGLLIARLGVSPLIATLGV 131

Query: 133 QYIVLGITRVLRPVSGGAVPDSVRWMVEGSLFGIPLPVFWGIVTMLVAWKLLYGSRYGLH 192
             ++ G+  V      G VP + + +  GS+ G+P+ V   +   + A   L  +  G H
Sbjct: 132 GLVLQGVLTVAFTSLQGKVPQAYQALAYGSVAGVPVAVLILLAVAVAAAFALTRTVAGAH 191

Query: 193 LFAIGGGVASGSADAARNFGIPANRNILLAYVICTLFAALAGVFLAGRIVSGDPNVGL-- 250
           LFA+G     G+AD+AR  GI  +R ++ A+ +  L + LAG++LA  + +G P VG   
Sbjct: 192 LFAVG-----GNADSARLAGIRTSRVLVGAHAMAGLMSGLAGLYLASWLGAGTPWVGRDG 246

Query: 251 LMELDAITAVAIGGTQLSGGVGSLHGTVIGVAALALLSNGMNLLNVTPFVQTAIKGILLM 310
             +LD+I AV IGGT L+GG GS+ GT+ GV   A +    N+L +  F+   ++G++++
Sbjct: 247 GYDLDSIAAVVIGGTLLAGGRGSIAGTMAGVFVFATIDAVFNMLQIDSFLSQVLRGLIVV 306

Query: 311 AVVALQSRKKIG 322
             V + + +  G
Sbjct: 307 IAVGVYTFRNKG 318