Pairwise Alignments

Query, 323 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 319 a.a., Fructose ABC transporter, permease component FrcC from Variovorax sp. SCN45

 Score =  145 bits (365), Expect = 2e-39
 Identities = 99/309 (32%), Positives = 152/309 (49%), Gaps = 18/309 (5%)

Query: 25  PLVIAIAMALWLAATTSQFGQSSNLANLVAQGMPLLITAVGQMFVVLVGGLDLSIGSVVS 84
           P +  +   ++ A  + +F    NL+ ++ Q M + + A+GQ  ++L  G+DLS G V++
Sbjct: 16  PWLALLGACIFFATQSDRFLTGGNLSLILQQVMVVGVIAIGQTLIILTAGIDLSCGMVMA 75

Query: 85  FTTAILA-----LDLPGFVTIPAVFVLAGLIGATNGYCVTRLSVHPIVATLSMQYIVLGI 139
               I++     L LP  V I     +  L G  NG  VTR+ + P + TL    I   I
Sbjct: 76  LGGIIMSKFATELGLPAPVAILCGIGVTTLFGLLNGLLVTRIKLPPFIVTLGTLNIAFAI 135

Query: 140 TRVLRPVSGGAVPDSVRWMVE-GSLFGIP-LPVFWGIVTMLV----AWKLLYGSRYGLHL 193
           T++    S   + D    +   G+ F I    V WG V MLV    AW +L  +  G H+
Sbjct: 136 TQLYS--SSQTITDLPGGLTGLGTTFSIGNAEVAWGAVLMLVLYGLAWFVLRETAAGRHI 193

Query: 194 FAIGGGVASGSADAARNFGIPANRNILLAYVICTLFAALAGVFLAGRIVSGDPNVGLLME 253
           +A+G      +A+A R  GIP  R +L  YV   +   +A +    R   GDPN G    
Sbjct: 194 YAVGN-----NAEATRLVGIPTQRVLLGVYVAAGVLYGIASLLSVARTGVGDPNAGQTEN 248

Query: 254 LDAITAVAIGGTQLSGGVGSLHGTVIGVAALALLSNGMNLLNVTPFVQTAIKGILLMAVV 313
           LDAITAV +GGT L GG G + G++IGV  + +  NG+ L+ V+   Q  + G+L++  V
Sbjct: 249 LDAITAVVLGGTSLFGGRGIVLGSLIGVLIVGVFRNGLTLMGVSSIYQVLVTGVLVILAV 308

Query: 314 ALQSRKKIG 322
                 + G
Sbjct: 309 TADQLSRRG 317