Pairwise Alignments

Query, 323 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 328 a.a., arabinose ABC transporter permease AraH from Escherichia coli ECRC62

 Score =  143 bits (361), Expect = 5e-39
 Identities = 79/265 (29%), Positives = 142/265 (53%), Gaps = 10/265 (3%)

Query: 61  ITAVGQMFVVLVGGLDLSIGSVVSF----TTAILALDLPGFVTIPAVFVLAGLIGATNGY 116
           + A G +F +  G  DLS+ SV++     T  ++ L    ++ + A  +L  L G  NG+
Sbjct: 63  MVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESLWIGVAAGLLLGILCGLVNGF 122

Query: 117 CVTRLSVHPIVATLSMQYIVLGITRVLRPVSGGAVPDSVRWMVE-GSLFGIPLPVFWGIV 175
            + +L ++ ++ TL+   IV G+  ++       + D   + +   + FG+P P++  + 
Sbjct: 123 VIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDESFFALGYANWFGLPAPIWLTVA 182

Query: 176 TMLVAWKLLYGSRYGLHLFAIGGGVASGSADAARNFGIPANRNILLAYVICTLFAALAGV 235
            +++   LL  + +G +  AIGG     + +AAR  G+P  R  ++ +V+  L +A+AG+
Sbjct: 183 CLIIFGLLLNKTTFGRNTLAIGG-----NEEAARLAGVPVVRTKIIIFVLSGLVSAIAGI 237

Query: 236 FLAGRIVSGDPNVGLLMELDAITAVAIGGTQLSGGVGSLHGTVIGVAALALLSNGMNLLN 295
            LA R+ SG P   +  EL  I+A  +GG  L GG+G +   V G+  L  + N MNLLN
Sbjct: 238 ILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLN 297

Query: 296 VTPFVQTAIKGILLMAVVALQSRKK 320
           ++PF Q  ++G++L+A V     K+
Sbjct: 298 ISPFAQYVVRGLILLAAVIFDRYKQ 322