Pairwise Alignments

Query, 323 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 328 a.a., L-arabinose ABC transporter permease AraH from Dickeya dianthicola ME23

 Score =  137 bits (345), Expect = 4e-37
 Identities = 86/302 (28%), Positives = 151/302 (50%), Gaps = 12/302 (3%)

Query: 26  LVIAIAMALWLAATTSQFGQSSNLANLVAQGMPLLITAVGQMFVVLVGGLDLSIGSVVSF 85
           LV+  A+ L        F    N+  L        + A G +F +  G  DLS+ SV++ 
Sbjct: 28  LVVFAALFLACMLFVPNFATFVNMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIAC 87

Query: 86  ----TTAILALDLPGFVTIPAVFVLAGLIGATNGYCVTRLSVHPIVATLSMQYIVLGITR 141
               T  ++ +    ++ + A  +L    G  NG+ + +L ++ ++ TL+   IV G+  
Sbjct: 88  AGVTTAVVINVSESLWLGVGAGLLLGVAFGLLNGFVIAQLKINALITTLATMQIVRGLAY 147

Query: 142 VLRPVSGGAVPDSVRWMVEG--SLFGIPLPVFWGIVTMLVAWKLLYGSRYGLHLFAIGGG 199
           ++       + D  R+   G  +  G+P P++  ++ M++   LL  + +G +  AIGG 
Sbjct: 148 IISDGKAVGIEDE-RFFTLGYANWLGLPAPIWLTVICMVLFGLLLNKTTFGRNTLAIGG- 205

Query: 200 VASGSADAARNFGIPANRNILLAYVICTLFAALAGVFLAGRIVSGDPNVGLLMELDAITA 259
               + +AAR  G+P  R  ++ + +  L +A AG+ LA R+ SG P   +  EL  I+A
Sbjct: 206 ----NEEAARLAGVPVVRTKIIIFGLSGLVSAAAGIILASRMTSGQPMTSIGYELIVISA 261

Query: 260 VAIGGTQLSGGVGSLHGTVIGVAALALLSNGMNLLNVTPFVQTAIKGILLMAVVALQSRK 319
             +GG  L GG+G +   V GV  L  + N MNLLN++PF Q  ++G++L+A V     K
Sbjct: 262 CVLGGVSLKGGIGKISYVVAGVLILGTVENAMNLLNISPFAQYVVRGLILLAAVVFDRYK 321

Query: 320 KI 321
           ++
Sbjct: 322 QL 323