Pairwise Alignments

Query, 323 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 340 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  149 bits (377), Expect = 7e-41
 Identities = 99/307 (32%), Positives = 153/307 (49%), Gaps = 31/307 (10%)

Query: 31  AMALWLAATTSQFGQSSNLANLVAQGMPLLITAVGQMFVVLVGGLDLSIGSVVSFTTAIL 90
           A+    +AT++ F   +N   +  Q   + +  +G   V++ GG+DLS+GSV++    + 
Sbjct: 32  ALVAVFSATSNAFFTVNNGMTIALQVTSIALLGIGATCVIITGGIDLSVGSVLALAGVVA 91

Query: 91  ALDLPGFVTIPAVFVLAGLI-----GATNGYCVTRLSVHPIVATLSMQYIVLGITRVL-- 143
           AL +        + +L G++     G  NG  VTR  + P +ATL M  I  G+   +  
Sbjct: 92  ALAVKELGMPVPIGMLLGILTGSLCGLINGLLVTRFKLPPFIATLGMMLIARGVALQITG 151

Query: 144 -RPVSGGAVPDSVRWMVEGSLF----------------GIPLPVFWGIVTMLVAWKLLYG 186
            R VSG  + +S   +  G+LF                GIP PV   +V  L    +L  
Sbjct: 152 ARAVSG--LGESFGELGNGALFRIVTIGDDGFPNVVFPGIPYPVILMVVIALAVSFMLNR 209

Query: 187 SRYGLHLFAIGGGVASGSADAARNFGIPANRNILLAYVICTLFAALAGVFLAGRIVSGDP 246
           S  G H++A+G      +ADAAR  G+   R     Y++    A L G  L  R+V+  P
Sbjct: 210 SILGRHIYAVGS-----NADAARLSGVNVARVTNFTYILSGTLAGLTGCVLMSRLVTAQP 264

Query: 247 NVGLLMELDAITAVAIGGTQLSGGVGSLHGTVIGVAALALLSNGMNLLNVTPFVQTAIKG 306
           N G++ ELDAI +  IGGT L GGVG++ GT IG   + +L NG+N+  V+ F Q  I G
Sbjct: 265 NEGVMYELDAIASAVIGGTSLIGGVGTISGTAIGAFVIGILRNGLNMNGVSAFTQQIIIG 324

Query: 307 ILLMAVV 313
           ++++  V
Sbjct: 325 LVILVTV 331