Pairwise Alignments

Query, 323 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 326 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  159 bits (402), Expect = 9e-44
 Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 16/305 (5%)

Query: 25  PLVIAIAMALWLAATTSQFGQSSNLANLVAQGMPLLITAVGQMFVVLVGGLDLSIGSVVS 84
           PL+  + + ++L   +  F    N  N++ Q   L I AVG  FV+L+GG+DLS+GSV++
Sbjct: 26  PLLGLLMLCVFLTFASENFLSLRNGLNILDQITVLGIMAVGMTFVILLGGIDLSVGSVLA 85

Query: 85  FTTAILA-----LDLPGFVTIPAVFVLAGLIGATNGYCVTRLSVHPIVATLSMQYIVLGI 139
            +  I+        +P  + I    V +   G   G  VT   V   +ATL+M  +  G+
Sbjct: 86  LSMMIMGWTANVAGMPMGMAIVLALVASAACGLVVGILVTAFRVPAFIATLAMMSVARGL 145

Query: 140 TRVLRPVSGGAVPDSVRWMVEGSL---FGI-PLPVFWGIVTMLVAWKLLYGSRYGLHLFA 195
             ++    G  +     W +  ++   FG+    V   +V +LV+W  L     G  ++A
Sbjct: 146 ANMI--TDGQQIVGFPDWFMMLAIERHFGVLTATVLLMLVVVLVSWAFLRFRSEGRTVYA 203

Query: 196 IGGGVASGSADAARNFGIPANRNILLAYVICTLFAALAGVFLAGRIVSGDPNVGLLMELD 255
           +GG     + + AR  GI      +  YV+C + A LAG+ LA R+ S  P+ G   ELD
Sbjct: 204 VGG-----NPEVARLAGINVPLVTICVYVVCAVLAGLAGIVLAARLDSVQPSSGFGYELD 258

Query: 256 AITAVAIGGTQLSGGVGSLHGTVIGVAALALLSNGMNLLNVTPFVQTAIKGILLMAVVAL 315
            I AV IGGT LSGG G + GT+IGV  + +L NG+NLLNV+PF+Q  I G++++  V  
Sbjct: 259 TIAAVVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVSPFLQQVIIGVVIVLAVGA 318

Query: 316 QSRKK 320
           ++ ++
Sbjct: 319 ETLRR 323