Pairwise Alignments

Query, 316 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 321 a.a., arabinose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  128 bits (321), Expect = 2e-34
 Identities = 90/290 (31%), Positives = 143/290 (49%), Gaps = 6/290 (2%)

Query: 19  SYYLLAMLLVILFVARPQMLNANVLGVFVRQVVPLGILVLGQLLVMRVKSIDLSGGGVIL 78
           S ++L+ L +  F++    LN   LG+ +  V   GI     L  +     DLS G VI 
Sbjct: 31  SIFVLSALFIDNFLSP---LNMRGLGLAISTV---GIAACTMLFCLASGHFDLSVGSVIA 84

Query: 79  LINYCISSGIFPGASLGFYVALALTTGLVIGLFNGVMVAKRRVSAVIVTLALSIVLVGFV 138
                    I    S+   V+ AL  GLV+GL NG+++AK R++A+I TLA   ++ G  
Sbjct: 85  CAGVVAGIVIRDTDSVVLGVSAALAMGLVVGLINGIVIAKLRINALIATLATMQIVRGLA 144

Query: 139 QYLSSGKPPGDVPKLFADLFNTRFAGLPSPVILWIAVTALMALLLSQTVFGRFVAAVGES 198
              S+GK  G + + F    N +  G+P P+I+ +        LL+ T +GR   A+G +
Sbjct: 145 YIFSNGKAVGVMDEGFFVFGNGQLLGVPVPIIITVLCFVFFGWLLNYTTYGRNTMAIGGN 204

Query: 199 MPAAHFSGVPVERTVILAHTLAGLMAAIAALVQTASIAVGSVRVGLDLPVLSVAATILGG 258
             AA  +GV V+RT I+   + GL+ A+A ++  + +  G   +G    +  ++A +LGG
Sbjct: 205 QEAALLAGVNVDRTKIIIFAVHGLIGALAGVILASRMTSGQPMIGQGFELTVISACVLGG 264

Query: 259 VVFGRGEGGVWGPFFGVLCFAFLFVAMTTFGVGDAGKLVAQGMIILLAAI 308
           V    G G +     GVL  A +  AM    +    + V +G I+LLA I
Sbjct: 265 VSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGSILLLAVI 314