Pairwise Alignments

Query, 290 a.a., LysR family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 312 a.a., DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) from Escherichia coli BW25113

 Score =  110 bits (275), Expect = 4e-29
 Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 6/259 (2%)

Query: 6   DLDLLRAFTAVVETGGFTRAAERVHRTQSTISQQIKKLETNLGHVLLIRDRATGSVRTTE 65
           DLDLLR F AV +   F  AA  V RTQS +SQQ+++LE  +G  L  R      +  TE
Sbjct: 12  DLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLL--TE 69

Query: 66  EGELLMSYARRILSVSAEANEALGRSMPSPKTVRLGVPEDFAGRRMIDLLSGFARASPRT 125
            G  L+ YAR+IL  + EA  +L  S      + +G  ++ A   +  LL+  +   P+ 
Sbjct: 70  HGIQLLGYARKILRFNDEACSSLMFSNLQG-VLTIGASDESADTILPFLLNRVSSVYPKL 128

Query: 126 RLDTISGWSFELRRLLQAGEIDLALVKREPGDGACIAKWEERLVWI--GDPLLAVGNDPV 183
            LD     +  +  +L++ E+DL +    P     +        W    + +L  G +P+
Sbjct: 129 ALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKG-EPI 187

Query: 184 PLAVFPSGCIYRERVIRAVERSGKAWRIAYSSQGLMGVQAAVASGLGISLLPNDAVLPEH 243
           PL +      +R+ V+  + ++   WR+AY +  L  V+AAV +GLG++  P + + P+ 
Sbjct: 188 PLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDL 247

Query: 244 RLLHETDGFLPEPASELAL 262
           R+L   DG  P P +E  L
Sbjct: 248 RVLSGVDGLPPLPDTEYLL 266