Pairwise Alignments

Query, 412 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 417 a.a., putative arabinose efflux transporter from Escherichia coli BL21

 Score =  105 bits (263), Expect = 2e-27
 Identities = 99/402 (24%), Positives = 163/402 (40%), Gaps = 17/402 (4%)

Query: 12  APACDTTSG---------KRSKPGLSRSLTLLFAAASGLAV-ANAYFAHPLLDVIADDLS 61
           APA DT            KR  P   R    LF+A  GLA  A  Y   P+L V++ +  
Sbjct: 10  APASDTDKQSISQPNQFIKRGTPQFMRVTLALFSA--GLATFALLYCVQPILPVLSQEFG 67

Query: 62  LPRATIGFVVGATQLGYGLGLVLLVPVGDLVDRRNLVIIQSLL-SVLALLCVGFAPTEEV 120
           L  A     +  +     +GL+   P+ D + R+ +++   LL S+  LL         +
Sbjct: 68  LTPANSSISLSISTAMLAIGLLFTGPLSDAIGRKPVMVTALLLASICTLLSTMMTSWHGI 127

Query: 121 LFP-ALIAMGFFAVATQAFVAYAASLARPEERGAVVGTVTSGIVLGILLARTVAGAVVDI 179
           L   ALI +    VA    + Y +    P      +G   SG  +G +  R ++G   D 
Sbjct: 128 LIMRALIGLSLSGVAAVG-MTYLSEEIHPSFVAFSMGLYISGNSIGGMSGRLISGVFTDF 186

Query: 180 AGWRAVYLLSAAFTLAITAILARVVPAQPKSGPAVSYPKLIGSLFTLFLQEPVLRVRAIL 239
             WR        F LA   +  +++P      P    PK +   F L  ++  L +    
Sbjct: 187 FNWRIALAAIGCFALASALMFWKILPESRHFRPTSLRPKTLFINFRLHWRDRGLPLLFAE 246

Query: 240 AFLIFADVTTLLTPLVLPLSAPPYSLSHAAIGLFGLAGAAGALGASRAGRWTDEGFGQRV 299
            FL+     TL   +   L   P+ +S A +GL  LA   G   + +AG  T   +G+  
Sbjct: 247 GFLLMGSFVTLFNYIGYRLMLSPWHVSQAVVGLLSLAYLTGTWSSPKAGTMTTR-YGRGP 305

Query: 300 TGVALTLMLCSWILIGLLPYSILFLVTGVLLLDFGLQAVHVASQGLIYRVRPEAQSRLTA 359
             +  T ++   +L+ L   S+  +  G+LL   G  A H  +   I      A+ + ++
Sbjct: 306 VMLFSTGVMLFGLLMTLFS-SLWLIFAGMLLFSAGFFAAHSVASSWIGPRAKRAKGQASS 364

Query: 360 AYMVFYSTGSALGSSISTLVYARWAWTGVSMLGAGIAAAALL 401
            Y+  Y  GS++  ++  + +  + W GV    A +   ALL
Sbjct: 365 LYLFSYYLGSSIAGTLGGVFWHNYGWNGVGAFIALMLVIALL 406