Pairwise Alignments

Query, 304 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 304 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  166 bits (419), Expect = 8e-46
 Identities = 109/306 (35%), Positives = 160/306 (52%), Gaps = 8/306 (2%)

Query: 4   VDLRHADLNLLVVLNALLDERSVTRAAMRLGMSQPAVSRALARLRALFSDALLVDGPGGY 63
           V L+  DLNLL+V + +L E+ V+  A  LG+SQPA+S ALARLR L  D L +    G 
Sbjct: 1   VQLKDIDLNLLLVFDRMLAEKRVSAVAESLGLSQPAISNALARLRKLLGDELFLRTARGM 60

Query: 64  LLTSRAEDLRPLLRNTLAGVSELLDGRT-FDPMQATGSVRLLMLDLEAAVLAPRLIASLA 122
             T  A  L   +   +  +   L+ +  FDP  +T S  L M D+      P+L+ +L+
Sbjct: 61  EPTPFALQLAEPVAYAMGALHTALNQQVVFDPATSTRSFTLAMTDIGEIYFTPKLMEALS 120

Query: 123 VQAPAVDLQVV----PPGLRPLEALEADAVDALIGVVEDAPAGVKKRKLYQDNFVTLMRA 178
           V AP V +  +       LR  + LEA  VD  IG++    AGV +R+L+   +V L   
Sbjct: 121 VAAPGVTVSTLRNNTATNLR--DELEAGHVDIAIGLLPQLKAGVFQRRLFLQQYVCLFSQ 178

Query: 179 EHPTAA-RKLTLERFLELDHVVVSITGTGRAWVDEILARSGRKRRVKVRVPSFFAAVEIA 237
            HP A  R ++L+ F   DHV V   GTG    D+++A  G +RR+K+RVP F A   I 
Sbjct: 179 AHPLAKKRSVSLKDFSAADHVQVLAAGTGHGKADDVMAAQGIQRRIKLRVPHFVAIGHIL 238

Query: 238 ARSDLVMTLPSSLARTAADMRRFVMASPPLDLGSVVISLAWHARHQDAPRHVWLRRTIAA 297
             S ++ T+P  LA++ A+    V    P+ L  + I+L WHA+    P + W+R  +  
Sbjct: 239 HSSHMIATVPERLAQSIAEPFGLVWRPHPVALPQIAINLFWHAKAHRDPGNQWMRGVLFD 298

Query: 298 AVADIG 303
             AD G
Sbjct: 299 NFADGG 304