Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 303 a.a., PCP degradation transcriptional activation protein from Xanthobacter sp. DMC5

 Score =  110 bits (276), Expect = 3e-29
 Identities = 96/314 (30%), Positives = 143/314 (45%), Gaps = 24/314 (7%)

Query: 1   MDWRRIDLNLLKVLAVMLEERSVARCAERLFVSPSAVSHALAKLRQMFSDPLFVRTGGGM 60
           MD  R+DLNLL  L  +L ER+V R A RL +S  AVS  LA+LR +F DPL V    GM
Sbjct: 1   MDTSRLDLNLLVTLEALLAERNVTRAAARLHLSQPAVSAQLARLRDLFDDPLLVPARRGM 60

Query: 61  LPTARAQSLERSLSLLKAVLDVELEAGRVSAPGATFEPGESVRDIRIVSPGALEISLLPV 120
            PT +A  L   L      L   LEA         F+P  +   + I     ++ +++  
Sbjct: 61  TPTVKAVELAGPLRAALDQLRATLEA-------RDFDPATADLTVTIACSDYIQAAVVMP 113

Query: 121 LAAILRSRAPHWSLTIEPFERRSYEIDLATGRVDFVLSVGGATPTGALVDAAVVWEDELV 180
           L   LR+RAP   + +        E  LA+G  D VL+     PT A +    ++  E  
Sbjct: 114 LVVALRARAPGVRVAVRHLMPDLIEQQLASGETDLVLTT--PRPTQAHLRTQHLFA-ETY 170

Query: 181 VLAGPRS--ALHAGSDRISTELYLAQQHIYPVP-WPTSQNYLDVELARAGKHRKIAFSVP 237
           VL G R    L  G   +S E Y   +H+   P     +  +D  LA  G  R +  S  
Sbjct: 171 VLIGRRGHPRLRRG---LSIEDYAELEHVIVSPSGGQFRTPVDEGLAALGHRRSVVMSAA 227

Query: 238 SYAALGHVLEATDLIASMPDRSARALICRHPDLRLIRLDPPRRSQ---LSLLWGISALQE 294
           S+  +  ++ A+D++A +P R     + R P  RL+ ++ P  ++   + LLW       
Sbjct: 228 SFLFIPEIVAASDVVALVPRR-----LLRDPPARLVMIELPWLAEGFDVDLLWHERTHGH 282

Query: 295 PAISWARSIIQDAA 308
               W R++I + A
Sbjct: 283 AGQRWLRALIAEVA 296