Pairwise Alignments

Query, 382 a.a., membrane efflux protein from Sinorhizobium meliloti 1021

Subject, 355 a.a., Efflux membrane fusion protein, RND family from Pseudomonas putida KT2440

 Score =  150 bits (379), Expect = 5e-41
 Identities = 108/339 (31%), Positives = 161/339 (47%), Gaps = 5/339 (1%)

Query: 43  AESADPRLAPPLVRVAEATRPERAERAFTGTIAARVQSNLGFRVPGKIVERLVDVGQQVK 102
           +E   P +  P++ V    + +     F G+I AR +S LGFRV G+I  R +DVG QVK
Sbjct: 19  SEEEAPEVIRPVLSVKVEPQVQSQLGRFAGSIQARFESTLGFRVSGRIARRWLDVGAQVK 78

Query: 103 AGQALMRIDETDLRLALTAKRNAVAAARAVLVQAIADERRYATLVKGGVAATPQRYEQAK 162
            G  L  +D TD +  L A    +A  +A  + A AD RR   L   GV A  Q  + A+
Sbjct: 79  PGDTLATLDPTDQQNQLRAAEGDLAKVQAQWINAQADARRQQQLYDRGVGAQAQ-LDIAQ 137

Query: 163 AALDTAAAQLAAAEAEARVAENETTYSVLVAGADGTVVATLGEPGQVVAAGQAVVQLAHA 222
             L T +A L  A +    A ++  YS L A     + A   E GQ V AGQAVV LA  
Sbjct: 138 TNLKTTSAALEQARSAVSQARDQLDYSTLRADHAAVITAWQAEAGQTVTAGQAVVTLARP 197

Query: 223 GLREALVALPETVRPAIGSEAEASVYG--SDGRRGRARMRQISDAADPQTRTYEARYVLD 280
            ++EA++ LP  +   +      +V           A +R++   AD  TRT  AR  L 
Sbjct: 198 DVKEAVIDLPIGLAEQLSKGLTFTVASQLDPTINTTASLRELEPQADATTRTRRARLTLA 257

Query: 281 GDAASAPLGATVTISIRNGEGQSEVAVPVGAVLNDGSRTGVWVVDQASATARFVPIE-IK 339
              A+  LG  +++++ + E      +P+ A+L    +T VWV+D  + T     +  I 
Sbjct: 258 STPAAFHLGTAISVTL-SSEVSPRSELPLSALLERDGKTQVWVIDTQNKTVATRDVALID 316

Query: 340 RLGEETASVTGIELGEQVVALGAHLLKDGAPVRTELQAE 378
           R  +      G++ GE+VV  G + LK G  V  +  A+
Sbjct: 317 RTADSIVLSAGVQPGERVVTAGVNSLKPGQKVTFDEDAQ 355