Pairwise Alignments

Query, 382 a.a., membrane efflux protein from Sinorhizobium meliloti 1021

Subject, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

 Score =  177 bits (448), Expect = 5e-49
 Identities = 119/332 (35%), Positives = 175/332 (52%), Gaps = 6/332 (1%)

Query: 44  ESADPRLAPPLVRVAEATRPERAERAFTGTIAARVQSNLGFRVPGKIVERLVDVGQQVKA 103
           + A P  AP    V +    E A  ++ G + AR +  L FR+ GK+ +RLV+ GQ+VKA
Sbjct: 23  QEAAPPAAPRPALVVQPQPAEAAADSYPGEVRARFEPELAFRIGGKVSKRLVEEGQRVKA 82

Query: 104 GQALMRIDETDLRLALTAKRNAVAAARAVLVQAIADERRYATLVKGGVAATPQRYEQAKA 163
            Q L  +D  D+RL L A R  +AAA A L    A+  RY  L++  + +  Q Y+ A+ 
Sbjct: 83  DQPLAELDPQDVRLQLEANRAQLAAAEANLALVRAERDRYQKLLERQMVSHSQ-YDNAEN 141

Query: 164 ALDTAAAQLAAAEAEARVAENETTYSVLVAGADGTVVATLGEPGQVVAAGQAVVQLAHAG 223
                 A+L  A+AE  VA N+  Y+VL A   G +     E GQVVAAGQ V  LA  G
Sbjct: 142 LYRAGLARLKQAKAEFDVAGNQAEYAVLRAPQAGVIAKRQVEVGQVVAAGQTVFTLAADG 201

Query: 224 LREALVALPET--VRPAIGSEAEASVYGSDGRRGRARMRQISDAADPQTRTYEARYVLDG 281
            RE  + LPE    R A+G      ++     R + R+R++S AADP++RT+ AR     
Sbjct: 202 EREVAIGLPEQQFARFAVGQPVSVELWSHPQARFQGRIRELSPAADPRSRTFAARIAFTT 261

Query: 282 DAASAPLGATVTISIRNGEGQSEVAVPVGAVLNDGSRTGVWVVDQASATARFVPIEIKRL 341
            A  A LG +  + I   +G   +AVP+ AV  +  +  VW V++ S   R   + +   
Sbjct: 262 AAVPAELGQSARVFIAK-DGLIPLAVPLSAVTAENGQAYVWRVNKESRLER-ATVRLGAY 319

Query: 342 GEETASV-TGIELGEQVVALGAHLLKDGAPVR 372
           G ++  V  G++ G+ VVA G H+L++G  VR
Sbjct: 320 GSDSVPVLEGLDPGDWVVAAGGHVLREGQEVR 351