Pairwise Alignments

Query, 382 a.a., membrane efflux protein from Sinorhizobium meliloti 1021

Subject, 371 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  312 bits (800), Expect = 8e-90
 Identities = 181/364 (49%), Positives = 240/364 (65%), Gaps = 11/364 (3%)

Query: 12  MKRKFLLTAIGLVAAAAGAAFAFVFETPARDAESADPRLAPPLVRVAEATRPERAERAFT 71
           M R+ LL+   ++ A   A  A   +TP+      DPR   PLVR A         R+FT
Sbjct: 1   MARRRLLS-FAVICALPFALAACGEKTPS------DPRTQAPLVRAATVQGAGVESRSFT 53

Query: 72  GTIAARVQSNLGFRVPGKIVERLVDVGQQVKAGQALMRIDETDLRLALTAKRNAVAAARA 131
           GT+AARV+S+LGFRV GK++ERLVD GQ VK GQ LMR+D  DL LA   ++  VAAARA
Sbjct: 54  GTVAARVESDLGFRVSGKVLERLVDAGQTVKRGQPLMRLDPVDLELAARTQQETVAAARA 113

Query: 132 VLVQAIADERRYATLVKGGVAATPQRYEQAKAALDTAAAQLAAAEAEARVAENETTYSVL 191
             +Q   DE RY  L +G  A +   Y+Q KAA D A AQL+AA+A+A VA N + Y+VL
Sbjct: 114 RALQTTEDEARYRGL-RGTGAISSSAYDQVKAAADAAKAQLSAAQAQADVARNASRYAVL 172

Query: 192 VAGADGTVVATLGEPGQVVAAGQAVVQLAHAGLREALVALPETVRPAIGSEAEASVYGSD 251
           VA  DG V+ TL EPGQVV AGQ VV+LA AG REA++ LPET+RPA+GS   A+ +G +
Sbjct: 173 VADGDGIVMETLAEPGQVVNAGQTVVRLAQAGQREAVIQLPETLRPALGSTGLATRFGKE 232

Query: 252 GRRGRARMRQISDAADPQTRTYEARYVLDGDAASAPLGATVTISIRNGEG--QSEVAVPV 309
           G    A +RQ+S+ AD  TRT+EARYVL+G+ A+ PLGATVTI I + +   Q  + VP+
Sbjct: 233 GVSIPATLRQLSNTADRLTRTFEARYVLEGELAATPLGATVTIQIPDAQAATQGRLQVPL 292

Query: 310 GAVLNDGSRTGVWVVDQASATARFVPIEIKRLGEETASVTG-IELGEQVVALGAHLLKDG 368
           G++ + G   GVWV+    A   + P+ I+ +G++ A VTG I+ GE++VALGAHLL++G
Sbjct: 293 GSLFDAGKGPGVWVIHGEPAKVAWRPVAIQHMGDDAARVTGQIQQGERIVALGAHLLREG 352

Query: 369 APVR 372
             VR
Sbjct: 353 EQVR 356