Pairwise Alignments

Query, 382 a.a., membrane efflux protein from Sinorhizobium meliloti 1021

Subject, 363 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  152 bits (385), Expect = 1e-41
 Identities = 107/347 (30%), Positives = 170/347 (48%), Gaps = 6/347 (1%)

Query: 33  AFVFETPARDAESADPRLAPPLVRVAEATRPERAERAFTGTIAARVQSNLGFRVPGKIVE 92
           A V  + A   + A    AP  V  A A +      +  GT+  RV S L F+  G++V 
Sbjct: 13  AIVLASIAGCDDKAAVNPAPRYVLSATALKESAGGMSLAGTVQPRVTSALSFQATGRVVS 72

Query: 93  RLVDVGQQVKAGQALMRIDETDLRLALTAKRNAVAAARAVLVQAIADERRYATLVKGGVA 152
           R V+VG +VKAGQ L R+D   L  A+ + + +V  A+A L  A+   +R  +L    V 
Sbjct: 73  RYVEVGDEVKAGQVLARLDPLALAFAVQSAQASVQDAQAKLQNAVITAKRQRSLAAVNVT 132

Query: 153 ATPQRYEQAKAALDTAAAQLAAAEAEARVAENETTYSVLVAGADGTVVATLGEPGQVVAA 212
           +  +  E+A+ +L  A A +  A+A  R A  +  Y+ L A  DG + +   E GQ VAA
Sbjct: 133 SV-ESLEEAEQSLTAAQAAVDVAQARRRKASEQLNYAELKAHFDGVITSVSVETGQTVAA 191

Query: 213 GQAVVQLAHAGLREALVALPETVRP--AIGSEAEASVYGSDGRRGRARMRQISDAADPQT 270
           GQAV+Q+A+ G R+A+V LPE+      +G   E ++      +    +R+I+ AAD  T
Sbjct: 192 GQAVLQIAYLGERDAVVDLPESQLKDVTLGHRFEVALQMDPAVKWTGELREIAPAADAAT 251

Query: 271 RTYEARYVLDGDAASAPLGATVTIS-IRNGEGQSEVAVPVGAVLNDGSRTGVWVVDQASA 329
           R    +  +     +  LG  VT+S +        + VP  A+L       VWV++ +S 
Sbjct: 252 RMRRVKIAIHDAPEAFRLGTVVTVSPLMARNTDKPLVVPATAILERQQAHFVWVINPSSL 311

Query: 330 TARFVPIEI--KRLGEETASVTGIELGEQVVALGAHLLKDGAPVRTE 374
           T     I++      +    + G++ GEQ+V  G + L+ G  +R E
Sbjct: 312 TVSLREIQLMPASQADSVRVLGGLQEGEQIVIAGVNSLQPGQKIRIE 358