Pairwise Alignments

Query, 382 a.a., membrane efflux protein from Sinorhizobium meliloti 1021

Subject, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  119 bits (298), Expect = 1e-31
 Identities = 93/311 (29%), Positives = 146/311 (46%), Gaps = 19/311 (6%)

Query: 71  TGTIAARVQSNLGFRVPGKIVERLVDVGQQVKAGQALMRIDETDLRLALTAKRNAVAAAR 130
           TG I    ++ LGFR+ G++V R VDVG  VK G+ +  +D  D         N + +A+
Sbjct: 73  TGEIRPTEETALGFRLDGRVVSRAVDVGAVVKQGEVIATLDARD-------SENQLQSAK 125

Query: 131 AVLVQAIADER-------RYATLVKGGVAATPQRYEQAKAALDTAAAQLAAAEAEARVAE 183
           A L +A A ER       R   L   G  A  Q  ++A++   +A +   +A+A     +
Sbjct: 126 ADLARAAASERLAEQNLKRMKQLAPNGAIARSQ-LDEAQSNWSSAVSVRESAQASVNSEQ 184

Query: 184 NETTYSVLVAGADGTVVATLGEPGQVVAAGQAVVQLAHAGLREALVALPETVRPAIGSE- 242
           +   Y+ L A   G + A    PGQVV AGQ VV+LA    R+A+  + E +  +  ++ 
Sbjct: 185 DRLGYTRLSAPIAGVITAVSANPGQVVNAGQEVVRLATFAGRDAVFNVSERLIASGLNDP 244

Query: 243 -AEASVYGSDGRRGRARMRQISDAADPQTRTYEARYVLDGDAASAPLGATVTISIRNGEG 301
               S+  +   + +  +R +S  AD QTRT+  R  L        LGATV   +    G
Sbjct: 245 LVTVSLLSNPAIKTQGHVRDVSPLADAQTRTWRVRISLVEPPPEMVLGATVQGEV-TLPG 303

Query: 302 QSEVAVPVGAVLNDGSRTGVWVVDQASATARFVPIEIKRLGEETASVT-GIELGEQVVAL 360
            + + +P  A+   G R  V+VVD  + T R  PI ++   +    V  G+  G++V   
Sbjct: 304 GNVINLPASALTRQGGRPAVFVVDPQTQTLRLQPITLRHYSDSQMVVADGLAAGDKVATA 363

Query: 361 GAHLLKDGAPV 371
           G   L+ G  V
Sbjct: 364 GVSKLRAGEKV 374