Pairwise Alignments

Query, 1036 a.a., Cation/multidrug efflux protein from Sinorhizobium meliloti 1021

Subject, 1027 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score = 1172 bits (3031), Expect = 0.0
 Identities = 593/1002 (59%), Positives = 751/1002 (74%)

Query: 4    NLSALAVRERAVTLFFIVLLAAAGVYAFMSLGRAEDPSFTIKTLTVTTVWPGATAREMQD 63
            NLS LAV+ RAVTLF I+ + AAG+++F  LGRAEDPSFT+K +T+T  WPGATA+EMQ+
Sbjct: 5    NLSELAVKHRAVTLFLIIAILAAGIFSFGKLGRAEDPSFTVKVMTITAAWPGATAQEMQE 64

Query: 64   LVAEPLEKRIQELTWYDRVETTTRPGYAFLTVTLKDSTPPTAVEEEFYQARKKLGDEARN 123
             VA+ LEKR+QEL +YDRVET  +PG+  + +T K+ST P+ +++ FYQ RKKL DEA  
Sbjct: 65   QVADRLEKRLQELDYYDRVETIAQPGFVSMRMTYKESTRPSEIQDLFYQTRKKLSDEAAK 124

Query: 124  LPSGVFGPFVNDEYSDVSFALYALKAKGMPMRELVRQAEVIRQDLLHVPGVKKINILGER 183
            LP GV GPF NDEYSDV FALYAL+A+ +P R+ V+ AE +RQ LL++PGVKK+NILGE+
Sbjct: 125  LPQGVIGPFFNDEYSDVYFALYALEAEHLPHRQQVQMAEELRQGLLNLPGVKKVNILGEQ 184

Query: 184  PEQIFVEFSYAKLATLGISAQDIAAALQRQNTVTPAGSIDTRGPQVFIRFDGAYNSVQAI 243
             +++FVEFSY +LATLGI    I AAL  QN V P+G ++T G + +IR DGA++S+  I
Sbjct: 185  AQRVFVEFSYERLATLGIKPDQIFAALAAQNAVAPSGFVETAGARAYIRIDGAFDSLSLI 244

Query: 244  AATPIVAAGRTLKLSDFAEVRRGYEDPATYIIRHEGEPAIMLGAVMQQGWNGLELGKALE 303
               P+   GR L++++ A V RGYEDP +Y IRH+G+PA+MLG +M++ WNGLEL K+L+
Sbjct: 245  ENVPLEVNGRVLRIANVATVSRGYEDPPSYRIRHQGDPALMLGVIMEKHWNGLELDKSLK 304

Query: 304  ERSAAIARTLPLGMTLAKVSDQAVNIDAAVGEFMLKFAMALGVVLLVSLLSLGWRVGIVV 363
             + A I   LPLG+  AKVSDQA NI  AV EFMLKF +AL VV+++SLL+LG+RVG+VV
Sbjct: 305  AQEAKIQADLPLGVNFAKVSDQAKNIRLAVNEFMLKFFVALAVVMVISLLALGFRVGLVV 364

Query: 364  ALAVPLTLAVVFLIMLETGRFFDRITLGALILALGLLVDDAIIAIEVMVVKMEEGMDRIK 423
            A AVPLTL+VVF+IML TGR FDRITLGALI++LGLLVDDAIIAIE+MVVK+EEG DRI 
Sbjct: 365  AAAVPLTLSVVFVIMLLTGREFDRITLGALIISLGLLVDDAIIAIEMMVVKLEEGFDRIH 424

Query: 424  AAAYAWSHTAAPMLSGTLVTIIGLMPVGFARSTAGEYAGNIFWVVGFALIVSWVVAVIFT 483
            AA +AWS TAAPML+GTLVTIIG +PVGFARS AGEYAGNIFW+VGFALI SW+VAV+FT
Sbjct: 425  AATFAWSSTAAPMLTGTLVTIIGFLPVGFARSGAGEYAGNIFWIVGFALISSWLVAVVFT 484

Query: 484  PYLGVKMLPDIKPVEGGHHAIYDTPNYRRLRGIIEFAVRHKYVTCAVVGIVMALSVVGMG 543
            PYLGVK+LP IKPV GGH AIY    Y++LR +++  VR +++   +V     L V GMG
Sbjct: 485  PYLGVKLLPQIKPVPGGHDAIYAGRYYQKLRSLVQACVRRRWLVTGLVVGAFVLCVAGMG 544

Query: 544  GVKHQFFPTSDRPEVLVEVRMPEGASIETTIATVEKLERWLQEQPEADILTSYIGQGAPR 603
             VK QFFP SDR E+++EV MP G++ ++T A   +LE+ L ++P+  ++ +Y+G GAPR
Sbjct: 545  VVKKQFFPNSDRSELILEVYMPPGSAFKSTEAVAARLEKALLQEPQTTLVDTYVGGGAPR 604

Query: 604  FFFAMAPELPDPAFAKIVVLTPDSHAREALKLRLRAAVSDGLVPEGYVRVTQLVFGPYTP 663
            FF ++ PELPDPAFAK++V TPDSHAR+ALKLR+R  ++ G      VRVTQL+FGP  P
Sbjct: 605  FFLSLNPELPDPAFAKLIVQTPDSHARDALKLRMRERIAAGEFASARVRVTQLLFGPPVP 664

Query: 664  FPVEFRIMGPDPAQLYQISEKALEIMKGVPDVRQANRDWGNRTPVLRFVPDQDRLNLIGL 723
            FPV FR+ GP+   L  +SE   +++      + A  DWG RT   R V DQDRL L+G 
Sbjct: 665  FPVVFRVSGPNLDVLRGVSEDVRKVVAANTLTKDAFLDWGERTSGYRLVLDQDRLRLLGF 724

Query: 724  SPAEAAQQMQLLLSGIPVTQVRENIRNVPVVARSAGESRLDPARLADFSLMSRDGRQVPL 783
            +P E   Q+  LLSG P+T+VRE  R V VVAR+ G  R D   L + +L +  G  VPL
Sbjct: 725  TPNEVKSQLNALLSGNPITEVREGNRTVSVVARAQGGQREDLGNLNNMTLTNSAGTSVPL 784

Query: 784  DQIGHSEIRFEEPILKRRDRTPVITIRSDINEATQPPEVSQQIMTALQPLIASLPVGYRI 843
             Q+GH +   EEPILKRR+R   + +R+DI +  QPP+V   +   LQPLIA LP GY+I
Sbjct: 785  AQVGHFQAVMEEPILKRRNRATTVEVRADIIDGVQPPDVEMAVYKDLQPLIAKLPAGYQI 844

Query: 844  EMGGNIEESLKANVALVKIFPAMIAAMLIVIILQVRSLSTMTMVMLTAPLGLAGVVPVLL 903
            ++GG +EES KANVAL  +FP MI   L VI+ QVRS   M MV  TAPLGL G VP LL
Sbjct: 845  DIGGPVEESAKANVALAALFPIMILLTLTVIMFQVRSFGVMFMVFATAPLGLIGAVPTLL 904

Query: 904  LFNQPFGFNAILGLIGLAGILMRNTLILTEQIKENKAAGLHDYHAVIEATVQRTRPVILT 963
            LFNQPFGFNAILGLIG+ GILMRNTLI T+QI++N+  G+  + A+IEATV+R RPVILT
Sbjct: 905  LFNQPFGFNAILGLIGIGGILMRNTLIFTDQIRQNQDHGMPIHAAIIEATVRRARPVILT 964

Query: 964  ALAAVLAFVPLTHSVFWGSMAYTLIGGTAVGTVMILLFLPAL 1005
            ALAA LAF+PLT SVFW S+AY LIGG  VGTV+ LLFLPAL
Sbjct: 965  ALAAALAFIPLTLSVFWSSLAYVLIGGVLVGTVLTLLFLPAL 1006