Pairwise Alignments

Query, 1036 a.a., Cation/multidrug efflux protein from Sinorhizobium meliloti 1021

Subject, 1017 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score =  724 bits (1869), Expect = 0.0
 Identities = 395/1012 (39%), Positives = 610/1012 (60%), Gaps = 4/1012 (0%)

Query: 2    SFNLSALAVRERAVTLFFIVLLAAAGVYAFMSLGRAEDPSFTIKTLTVTTVWPGATAREM 61
            SFNLS  A++ ++   + + +    G++++ +LGR EDPSFTIKT+ + T WPGAT  E 
Sbjct: 4    SFNLSDWALKHQSFVWYLMFVSLLMGIFSYFNLGREEDPSFTIKTMVIQTRWPGATQDET 63

Query: 62   QDLVAEPLEKRIQELTWYDRVETTTRPGYAFLTVTLKDSTPPTAVEEEFYQARKKLGDEA 121
               V + +EK+++EL   D  ++ TRPG + + V L+D+T    + + +YQ RKK+ D  
Sbjct: 64   LYQVTDRIEKKLEELDSLDYTKSYTRPGESTVYVYLRDTTKAKDIPDIWYQVRKKIQDIR 123

Query: 122  RNLPSGVFGPFVNDEYSDVSFALYALKAKGMPMRELVRQAEVIRQDLLHVPGVKKINILG 181
               P+G+ GP  NDE+ DV  ++YA  A G+ +R+L    E  R ++  VP + KI ++G
Sbjct: 124  GEFPAGIQGPGFNDEFGDVFGSIYAFTADGLTLRQLRDYVEQARAEVRDVPNIGKIELVG 183

Query: 182  ERPEQIFVEFSYAKLATLGISAQDIAAALQRQNTVTPAGSIDTRGPQVFIRFDGAYNSVQ 241
             + E +++ FS  KLA LGI  + +  ALQ QN VTPAG I+    ++ +R  G + S +
Sbjct: 184  TQDEVLYLNFSTRKLAALGIDQRQVMQALQAQNAVTPAGMIEAGPERISVRTSGQFASEK 243

Query: 242  AIAATPIVAAGRTLKLSDFAEVRRGYEDPATYIIRHEGEPAIMLGAVMQQGWNGLELGKA 301
             +    +    R  +L+D A++ RGY DP + + R+ G+ AI L   M+ G N    G A
Sbjct: 244  DLQTVNLRINDRFFRLADIADIERGYVDPPSPMFRYNGQTAIGLAIGMKAGGNIQVFGAA 303

Query: 302  LEERSAAIARTLPLGMTLAKVSDQAVNIDAAVGEFMLKFAMALGVVLLVSLLSLGWRVGI 361
            L++R   + + LP+G+ +  VSDQAV +  AVG F      A+ +VL VS +SLG R G+
Sbjct: 304  LKKRMDQVVQDLPVGVGVHTVSDQAVVVKQAVGGFTSALFEAVVIVLAVSFVSLGVRAGL 363

Query: 362  VVALAVPLTLAVVFLIMLETGRFFDRITLGALILALGLLVDDAIIAIEVMVVKMEEGMDR 421
            VVA ++PL LA+VF+ M  +G    RI+LGALI+ALGLLVDDA+I +EVMV ++E G  +
Sbjct: 364  VVACSIPLVLAMVFVFMEYSGITMQRISLGALIIALGLLVDDAMITVEVMVTRLEMGESK 423

Query: 422  IKAAAYAWSHTAAPMLSGTLVTIIGLMPVGFARSTAGEYAGNIFWVVGFALIVSWVVAVI 481
             +AA +A++ TA PML+GTLVT+ G +P+G   S+AGEY   +F V+  ALIVSWVVAV 
Sbjct: 424  EQAATFAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVALIVSWVVAVF 483

Query: 482  FTPYLGVKMLPDIKPVEGGHHAIYDTPNYRRLRGIIEFAVRHKYVTCAVVGIVMALSVVG 541
            F P LGV +L   K      H        R   G + + +R++++T     ++ AL++  
Sbjct: 484  FAPVLGVHILKGDKLKA---HEAEPGRVGRAFEGGLLWCMRNRWLTIIGTVVLFALAIFC 540

Query: 542  MGGVKHQFFPTSDRPEVLVEVRMPEGASIETTIATVEKLERWLQEQPEADILTSYIGQGA 601
            M  V++QFFP+SDRPE+LV++ +P+ ASIE T   V++ E  +++ P+    ++YIGQGA
Sbjct: 541  MRFVQNQFFPSSDRPEILVDLNLPQNASIEETRKVVDRFEARIKDDPDLVHWSTYIGQGA 600

Query: 602  PRFFFAMAPELPDPAFAKIVVLTPDSHAREALKLRLRAAVSDGLVPEGYVRVTQLVFGPY 661
             RF+  +  +L +P +A++V+++     R+A+  RL+  + +  V  G   V  L  GP 
Sbjct: 601  IRFYLPLDQQLQNPYYAQLVIVSKGFEERQAMMDRLQKILHEEFVGVG-TNVQSLEMGPP 659

Query: 662  TPFPVEFRIMGPDPAQLYQISEKALEIMKGVPDVRQANRDWGNRTPVLRFVPDQDRLNLI 721
               P+++R+ G D  Q+ + + +   ++     + +   DW     VLR    QD+   +
Sbjct: 660  VGRPIQYRVSGADIDQVRKHAIELATLLDQNEHIGEMIYDWNEPGKVLRVEIAQDKARQL 719

Query: 722  GLSPAEAAQQMQLLLSGIPVTQVRENIRNVPVVARSAGESRLDPARLADFSLMSRDGRQV 781
            GLS  + A  M  ++SG+ +TQV +NI  V VVAR+    R  P  L +  +++ +G  +
Sbjct: 720  GLSSEDVANVMNSIVSGVQITQVNDNIYLVDVVARAEDSERGSPDTLQNLQILTPNGTSI 779

Query: 782  PLDQIGHSEIRFEEPILKRRDRTPVITIRSDINEATQPPEVSQQIMTALQPLIASLPVGY 841
            PL          E+P++ RRDR P ITI++ +N   QP ++  Q+   +    + LPVG+
Sbjct: 780  PLLSFATVRYELEQPLVWRRDRKPTITIKASVNGEIQPTDLVAQLKPKIDEFASKLPVGF 839

Query: 842  RIEMGGNIEESLKANVALVKIFPAMIAAMLIVIILQVRSLSTMTMVMLTAPLGLAGVVPV 901
             +  GG +EES KA   + K+ P M+  M   +++Q+ S+  + +V+  APLGL GVV  
Sbjct: 840  EVATGGTVEESAKAQGPIRKVIPLMLFLMATFLMIQLHSVQKLFLVVSVAPLGLIGVVLA 899

Query: 902  LLLFNQPFGFNAILGLIGLAGILMRNTLILTEQIKENKAAGLHDYHAVIEATVQRTRPVI 961
            L+    P GF AILG++ LAGI++RN++IL  QI E +A GL  + AV+EAT  R RP++
Sbjct: 900  LVPTGTPMGFVAILGILALAGIIIRNSVILVTQIDEFEAQGLSPWDAVVEATNHRRRPIL 959

Query: 962  LTALAAVLAFVPLTHSVFWGSMAYTLIGGTAVGTVMILLFLPALYAAWFRIK 1013
            LTA AA L  +P+   VFWG MAY +IGG  V T++ LLFLPALY AW++I+
Sbjct: 960  LTAAAASLGMIPIAREVFWGPMAYAMIGGIIVATLLTLLFLPALYVAWYKIR 1011