Pairwise Alignments

Query, 1036 a.a., Cation/multidrug efflux protein from Sinorhizobium meliloti 1021

Subject, 1030 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score = 1341 bits (3470), Expect = 0.0
 Identities = 658/1016 (64%), Positives = 821/1016 (80%)

Query: 1    MSFNLSALAVRERAVTLFFIVLLAAAGVYAFMSLGRAEDPSFTIKTLTVTTVWPGATARE 60
            + FNLSALAVRER++TLF IVL+A AG  AF  LGRAEDP FT+K +T+ T WPGATA+E
Sbjct: 4    LRFNLSALAVRERSITLFLIVLIAFAGTLAFFKLGRAEDPPFTVKQMTIITAWPGATAQE 63

Query: 61   MQDLVAEPLEKRIQELTWYDRVETTTRPGYAFLTVTLKDSTPPTAVEEEFYQARKKLGDE 120
            MQDLVAEPLEKR+QEL WYDR ET TRPG AF  V+L+D TPP+AV+EEFYQARKK GD+
Sbjct: 64   MQDLVAEPLEKRMQELRWYDRTETYTRPGLAFTMVSLQDKTPPSAVQEEFYQARKKAGDQ 123

Query: 121  ARNLPSGVFGPFVNDEYSDVSFALYALKAKGMPMRELVRQAEVIRQDLLHVPGVKKINIL 180
            A+ +P+GV GP +NDE+SDV+FA+YALKAKG P R+LVR AE +RQ LLHVPGVKK+NI+
Sbjct: 124  AKLMPAGVIGPMLNDEFSDVTFAVYALKAKGEPQRQLVRDAETLRQQLLHVPGVKKVNII 183

Query: 181  GERPEQIFVEFSYAKLATLGISAQDIAAALQRQNTVTPAGSIDTRGPQVFIRFDGAYNSV 240
            GE+ E+IFV FS+ +LATLGI+ QDI +AL  QN ++P+GS++T+GPQV +R DGA++ +
Sbjct: 184  GEQAERIFVSFSHDRLATLGITPQDIFSALDNQNALSPSGSVETQGPQVVVRVDGAFDQL 243

Query: 241  QAIAATPIVAAGRTLKLSDFAEVRRGYEDPATYIIRHEGEPAIMLGAVMQQGWNGLELGK 300
              I  TP+VA GR LKLSD A+V RGYEDPAT+++R++GEPA++LG VM++GWNGL+LGK
Sbjct: 244  AKIRETPVVAQGRPLKLSDVADVERGYEDPATFLVRNDGEPALLLGIVMREGWNGLDLGK 303

Query: 301  ALEERSAAIARTLPLGMTLAKVSDQAVNIDAAVGEFMLKFAMALGVVLLVSLLSLGWRVG 360
            ALE  +A I   +PLGMTL+KV+DQAVNI ++V EFM+KF +AL VV+LV  LS+GWRVG
Sbjct: 304  ALEAETAKINEGMPLGMTLSKVTDQAVNITSSVDEFMIKFFVALLVVMLVCFLSMGWRVG 363

Query: 361  IVVALAVPLTLAVVFLIMLETGRFFDRITLGALILALGLLVDDAIIAIEVMVVKMEEGMD 420
            +VVA AVPLTLA+VF++M  TG+ FDRITLG+LILALGLLVDDAIIAIE+MVVKMEEG D
Sbjct: 364  VVVAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYD 423

Query: 421  RIKAAAYAWSHTAAPMLSGTLVTIIGLMPVGFARSTAGEYAGNIFWVVGFALIVSWVVAV 480
            RIKA+AYAWSHTAAPMLSGTLVT IG MP GFA+STAGEY  N+FW+VG ALI SWVVAV
Sbjct: 424  RIKASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWVVAV 483

Query: 481  IFTPYLGVKMLPDIKPVEGGHHAIYDTPNYRRLRGIIEFAVRHKYVTCAVVGIVMALSVV 540
             FTPYLGVK+LP IK +EGGH AIY+T +Y R R ++ + + HK++    V      +V+
Sbjct: 484  AFTPYLGVKLLPRIKTIEGGHAAIYNTRHYNRFRALLGWVIAHKWLVAGTVVSTFVAAVL 543

Query: 541  GMGGVKHQFFPTSDRPEVLVEVRMPEGASIETTIATVEKLERWLQEQPEADILTSYIGQG 600
            GMG VK QFFPTSDRPEVLVE++MP G SIE T AT  K+E WL++Q EA I+T+YIGQG
Sbjct: 544  GMGLVKKQFFPTSDRPEVLVELQMPYGTSIEQTNATAIKVESWLRQQEEAKIVTTYIGQG 603

Query: 601  APRFFFAMAPELPDPAFAKIVVLTPDSHAREALKLRLRAAVSDGLVPEGYVRVTQLVFGP 660
             PRFF AMAPELPDP+FAKIVVLT +  AREALK RLR A S+GL P   VRVTQLVFGP
Sbjct: 604  PPRFFLAMAPELPDPSFAKIVVLTENQGAREALKHRLREAASEGLAPGAQVRVTQLVFGP 663

Query: 661  YTPFPVEFRIMGPDPAQLYQISEKALEIMKGVPDVRQANRDWGNRTPVLRFVPDQDRLNL 720
            Y+P+PV +R+MGPD +QL QI+ +   +++  P ++  N DWG   P L F  +QDRL  
Sbjct: 664  YSPYPVAYRVMGPDASQLRQIAARVQSVLQASPMMKTVNTDWGPLVPTLHFSLNQDRLQS 723

Query: 721  IGLSPAEAAQQMQLLLSGIPVTQVRENIRNVPVVARSAGESRLDPARLADFSLMSRDGRQ 780
            +GL+ A  +QQ+Q LL+G+P+T VRE+IR+V VV R+AG+ RLDPA++ +F+L+  +G++
Sbjct: 724  VGLTSASVSQQLQFLLTGVPITSVREDIRSVQVVGRAAGQIRLDPAQIENFTLVGSNGQR 783

Query: 781  VPLDQIGHSEIRFEEPILKRRDRTPVITIRSDINEATQPPEVSQQIMTALQPLIASLPVG 840
            VP+ QIG   IR E+PIL+RRDRTP +T+R DI E  QPP+VS  I   LQP++  LP G
Sbjct: 784  VPVSQIGDVSIRMEDPILRRRDRTPTMTVRGDIAEGLQPPDVSTAIWKDLQPIVTQLPAG 843

Query: 841  YRIEMGGNIEESLKANVALVKIFPAMIAAMLIVIILQVRSLSTMTMVMLTAPLGLAGVVP 900
            Y+IEM G+IEES KA+ A+V + P MIA  L++IILQVRS+S M MV LT+PLGL GVVP
Sbjct: 844  YKIEMAGSIEESAKASQAIVPLLPIMIALTLLIIILQVRSISAMVMVFLTSPLGLIGVVP 903

Query: 901  VLLLFNQPFGFNAILGLIGLAGILMRNTLILTEQIKENKAAGLHDYHAVIEATVQRTRPV 960
            VLLLF QPFG NA++GLI L+GILMRNTLIL  QI  N+  GL  + AV+EATVQR RPV
Sbjct: 904  VLLLFGQPFGINALVGLIALSGILMRNTLILIGQIDHNQLEGLAPFDAVVEATVQRARPV 963

Query: 961  ILTALAAVLAFVPLTHSVFWGSMAYTLIGGTAVGTVMILLFLPALYAAWFRIKPTA 1016
            +LTALAA+LAF+PLTHSVFWG++AYTLIGGT VGT+M L+FLPA+Y+ WF+I+P +
Sbjct: 964  LLTALAAILAFIPLTHSVFWGTLAYTLIGGTFVGTIMTLVFLPAMYSIWFKIRPNS 1019