Pairwise Alignments

Query, 1036 a.a., Cation/multidrug efflux protein from Sinorhizobium meliloti 1021

Subject, 1021 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score =  796 bits (2055), Expect = 0.0
 Identities = 434/1020 (42%), Positives = 628/1020 (61%), Gaps = 8/1020 (0%)

Query: 1    MSFNLSALAVRERAVTLFFIVLLAAAGVYAFMSLGRAEDPSFTIKTLTVTTVWPGATARE 60
            M FNLSA A+R R + LF ++LLAA G  ++  LG++EDP FT K + + T+WPGA+A E
Sbjct: 1    MGFNLSAWALRNRQIVLFLMILLAAIGAMSYTKLGQSEDPPFTFKAMVIRTLWPGASAEE 60

Query: 61   MQDLVAEPLEKRIQELTWYDRVETTTRPGYAFLTVTLKDSTPPTAVEEEFYQARKKLGDE 120
            +   V E +EK++ E   Y+R+ + +RPG + +T   +DS     + E +YQ RKK+ D 
Sbjct: 61   VARQVTERIEKKLMETGEYERIVSFSRPGESQVTFMARDSLHSKDIPELWYQIRKKVADI 120

Query: 121  ARNLPSGVFGPFVNDEYSDVSFALYALKAKGMPMRELVRQAEVIRQDLLHVPGVKKINIL 180
               LP  + GPF NDE+      +YAL  +G     L   A+ I+  L  V  V K++++
Sbjct: 121  RHTLPPEIQGPFFNDEFGTTFGNIYALTGEGFDYAVLKDYADRIQIQLQRVKDVGKVDLI 180

Query: 181  GERPEQIFVEFSYAKLATLGISAQDIAAALQRQNTVTPAGSIDTRGPQVFIRFDGAYNSV 240
            G + E++++E S  KLATLG+  + +  ALQ QN V+ AG  +T   ++ +R  G ++SV
Sbjct: 181  GLQDEKVWIELSNLKLATLGVPLEAVQKALQEQNAVSTAGFFETPSERLQLRVSGRFDSV 240

Query: 241  QAIAATPIVAAGRTLKLSDFAEVRRGYEDPATYIIRHEGEPAIMLGAVMQQGWNGLELGK 300
            + I   PI    RT ++ D AEV RG+ DP    +R  GE AI L   M+ G + L LGK
Sbjct: 241  EQIRQFPIRVGDRTFRIGDVAEVHRGFNDPPAPRMRFMGEDAIGLAVSMKDGGDILVLGK 300

Query: 301  ALEERSAAIARTLPLGMTLAKVSDQAVNIDAAVGEFMLKFAMALGVVLLVSLLSLGWRVG 360
            ALE     +A  LP GM L KVSDQ   + A VGEF+     AL +VLLVS  SLG R G
Sbjct: 301  ALEGEFERLAHNLPAGMALRKVSDQPAAVKAGVGEFVQVLVEALVIVLLVSFFSLGLRTG 360

Query: 361  IVVALAVPLTLAVVFLIMLETGRFFDRITLGALILALGLLVDDAIIAIEVMVVKMEEGMD 420
            +VVALA+PL LA+ F  M   G    +I+LGAL+LALGLLVDDAIIA+E+M +KME+G D
Sbjct: 361  LVVALAIPLVLAMTFAAMHYFGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYD 420

Query: 421  RIKAAAYAWSHTAAPMLSGTLVTIIGLMPVGFARSTAGEYAGNIFWVVGFALIVSWVVAV 480
            R+KAA+YAW+ TA PML+GTL+T  G +P+  A S+ GEY  +IF VV  AL+ SWV AV
Sbjct: 421  RLKAASYAWTSTAFPMLTGTLITAAGFLPIATAASSTGEYTRSIFQVVTIALLTSWVAAV 480

Query: 481  IFTPYLGVKMLPDIKPVEGGHHA-------IYDTPNYRRLRGIIEFAVRHKYVTCAVVGI 533
            +F PYLG ++LPD+  +    H         Y TP Y+R+R ++E+ VR +     +   
Sbjct: 481  VFVPYLGERLLPDLAKLHAARHGKDGHAPDPYATPFYQRVRRLVEWCVRRRKTVILLTIA 540

Query: 534  VMALSVVGMGGVKHQFFPTSDRPEVLVEVRMPEGASIETTIATVEKLERWLQEQPEADIL 593
                S++    V  QFFP S RPE++V++++ EGAS+  T   V++LE  L++Q   D  
Sbjct: 541  AFVGSILLFRFVPQQFFPASGRPELMVDLKLAEGASLANTAERVKQLEALLKQQDGIDNY 600

Query: 594  TSYIGQGAPRFFFAMAPELPDPAFAKIVVLTPDSHAREALKLRLRAAVSDGLVPEGYVRV 653
             +Y+G G+PRF+  +  +LP  +FA+ VVL      RE L+  L + V D   P+   RV
Sbjct: 601  VAYVGTGSPRFYLPLDQQLPAASFAQFVVLAKSMEDRERLRSWLISTV-DQQFPDLRARV 659

Query: 654  TQLVFGPYTPFPVEFRIMGPDPAQLYQISEKALEIMKGVPDVRQANRDWGNRTPVLRFVP 713
            T+L  GP   +PV+FR+ G    +   ++ +  + ++  P V   + DW   +  +    
Sbjct: 660  TRLENGPPVGYPVQFRVTGEHIEKARALAREVADKVRENPHVVNVHLDWEEPSKAVFLEI 719

Query: 714  DQDRLNLIGLSPAEAAQQMQLLLSGIPVTQVRENIRNVPVVARSAGESRLDPARLADFSL 773
            DQDR   +G+S +  A  +Q  L G  V+Q RE+   + ++ R   + R + A L   +L
Sbjct: 720  DQDRARALGVSTSHLASFLQSSLIGTTVSQYREDNELIEILLRGTLQERSELANLGSLAL 779

Query: 774  MSRDGRQVPLDQIGHSEIRFEEPILKRRDRTPVITIRSDINEATQPPEVSQQIMTALQPL 833
             + +G+ V L Q+   E  FEE I+  R+R P +T+R+DI +  QP  + +QI+  LQ +
Sbjct: 780  PTDNGQSVALSQVATLEYGFEEGIIWHRNRLPTVTVRADIYDQEQPATLVKQILPTLQEI 839

Query: 834  IASLPVGYRIEMGGNIEESLKANVALVKIFPAMIAAMLIVIILQVRSLSTMTMVMLTAPL 893
             A LP GY +E+GG +E+S +   ++    P  I  +L ++++Q+RS S   MV LTAPL
Sbjct: 840  RAKLPDGYLLEVGGTVEDSERGQKSVNAGMPLFIVVVLSLLMIQLRSFSRTVMVFLTAPL 899

Query: 894  GLAGVVPVLLLFNQPFGFNAILGLIGLAGILMRNTLILTEQIKENKAAGLHDYHAVIEAT 953
            GL GV   LL+F QPFGF A+LG I LAG++MRN++IL +QI+++ AAG+  + A+IEAT
Sbjct: 900  GLIGVTLFLLVFRQPFGFVAMLGTIALAGMIMRNSVILVDQIEQDIAAGMERWQAIIEAT 959

Query: 954  VQRTRPVILTALAAVLAFVPLTHSVFWGSMAYTLIGGTAVGTVMILLFLPALYAAWFRIK 1013
            V+R RP++LTALAAVLA +PL+ SVF+G MA  ++GG  V TV+ LLFLPALYAAWFR+K
Sbjct: 960  VRRFRPIVLTALAAVLAMIPLSRSVFYGPMAVAIMGGLIVATVLTLLFLPALYAAWFRVK 1019