Pairwise Alignments

Query, 505 a.a., reverse transcriptase from Sinorhizobium meliloti 1021

Subject, 482 a.a., Retron-type reverse transcriptase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  157 bits (398), Expect = 6e-43
 Identities = 125/416 (30%), Positives = 202/416 (48%), Gaps = 61/416 (14%)

Query: 32  RDMWGWLTDLRVLRHAWQRVASNKGGRTAGVDGMTVGRIRNRSEHRFLVDLQADLRSGAY 91
           +++ G +     L  A ++V SNKG  +AG+DGM+V  +R      +  + Q+ + +G Y
Sbjct: 54  KELMGKIVSPSNLVAALRQVVSNKG--SAGIDGMSVEELRQWFSSHYH-EFQSQIITGKY 110

Query: 92  RPSPARRKLIPKAGKPGQFRPLGIPTIRDRVVQGAAKILLEPIFEAQFWHVSYGFRPGRN 151
           R    R   IPK    G  R LGIPT +DR+VQ A   +L   ++  F   SYGFRP R 
Sbjct: 111 RVESVREVQIPKPN--GGVRILGIPTAKDRLVQQAISQVLSLHYDPTFSDRSYGFRPDRG 168

Query: 152 THGALEYIRRAALPQKRDEDTRRNRLPYPWVIEGDIKGCFDNINHHHLLERMRKRIGDRR 211
            H AL   R+A        D         W+++ D++  FD +NH  L+  +  RIGD+ 
Sbjct: 169 AHDAL---RQAGQEVSEGRD---------WIVDIDLEKFFDTVNHDRLMWLLGTRIGDKT 216

Query: 212 VVRLVGLFLKAGVLTEDQFLRTDAGTPQGGIISPLLANIALSAIEERYERWTYHRKKTQA 271
           +++L+G FL+AG+L +    +   G PQG  +SPLL+NI L  +++  E           
Sbjct: 217 LLKLIGKFLRAGMLKDGLVSQGVKGMPQGSPLSPLLSNIILDELDKELE----------- 265

Query: 272 RRKSNGVAAAASARDSDRIAGRCVYLPVRYADDFVVLVSGSLEEAMAEKSALADYLIKTT 331
                             + G   +  VRYADD +V+V  S   A    S+L  ++ +  
Sbjct: 266 ------------------VRG---HRFVRYADDLIVMVK-SEPSAKRVLSSLTAFIEQRM 303

Query: 332 GLTLLPEKTKVTAMTEGFEFLGFRFSVHWDKRYGYGPRVEIPKAKAANLRHKVKQLTQRD 391
            L +   K+K++   E   FLG    +          R+ + K     L+ K+KQLTQR+
Sbjct: 304 LLKVNKSKSKISRPYE-LNFLGHSILIE--------GRLGLSKTSEQRLKAKLKQLTQRN 354

Query: 392 SISVSLGEKLRGVNAITSGWANYYRYCVGAGRVFVALDWYIGLRLYCWLHKKRPKA 447
              +SL + ++ +N I  GW NY++     GR+  A++ ++  R+ C+  K+  +A
Sbjct: 355 R-GISLEQLVKELNPILRGWLNYFKNAQMIGRL-KAIEGWLNRRIRCFRLKQCKRA 408