Pairwise Alignments

Query, 551 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 531 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  344 bits (882), Expect = 6e-99
 Identities = 211/531 (39%), Positives = 312/531 (58%), Gaps = 15/531 (2%)

Query: 3   NLVEIRDLKVEATTDTGRRVEIIKGVSLDVAEGEIVALIGESGSGKTTIA---LTLMGYA 59
           NL+EIRDL VE  T       ++  VS D+  GE +AL+GESGSGK+  A   L L+ Y 
Sbjct: 5   NLIEIRDLSVEFVTGDHHH-RVVNNVSFDIKRGETIALVGESGSGKSVTAHSILRLLPY- 62

Query: 60  RPGCRISGGSVLVAGNDLVTLTEKQRAKVRGTEVTYVPQSAAAAFNPAATIMDQVIEVTR 119
            P  R   G++  AG DL+TL EK    +RG  +  + Q    + NP  +I  Q+ EV  
Sbjct: 63  -PLARHPSGTINYAGQDLLTLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLG 121

Query: 120 IHGLMAAAEARARAVELFRALSLPEPETIGSRYPHQVSGGQLQRLSAAMALISDPKLVIF 179
           +H  +    A  R +EL   + +PEP       PH++SGGQ QR+  AMAL ++P+L+I 
Sbjct: 122 LHKGLQGKVATQRTLELLDLVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIA 181

Query: 180 DEPTTALDVTTQIEVLRAFKSVMKKGGIAGVYVSHDLAVVAQIADHIVVLKGGEVQEVGT 239
           DEPTTALDVT Q+++L   K +  + G+A + +SHDL +V +IA  + V++ G + E   
Sbjct: 182 DEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQKGCIVEQAD 241

Query: 240 TEEILSSAKHPYTRELLSAFEPKPREAADAAERAPAPLLKIENLVAGYGASK---TDGLP 296
            E +  S +HPYT+ELL+A EP    A++A      PLL+++NL   +   K    + + 
Sbjct: 242 CETLFQSPQHPYTQELLAA-EPSGGPASNA---IGPPLLEVDNLKVWFPIKKGFLRNTVD 297

Query: 297 LVRAVEDVSLKVEKGRNLGIIGESGCGKSTLARAIAGILPAAVGKIVFDGKELGRSARER 356
            V+AV+ ++  + +G+ LGI+GESG GKSTL  AI  ++ A+ G I F+G++L   ++++
Sbjct: 298 YVKAVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLI-ASKGGIRFEGQQLDTLSQQQ 356

Query: 357 TRDQLREMQIVFQYADTALNPAKSVEDILDRPLVFYHGMNARARSLRIDELLDMVRLPRN 416
            R   REMQ+VFQ    +L+P   V +I+   L  +       +   I   L  V L   
Sbjct: 357 VRPLRREMQVVFQDPFGSLSPRMCVSEIVGEGLRIHKMGTPAEQEAAIIAALKEVGLDPE 416

Query: 417 LRHRRPGELSGGQKQRVNFARALAADPKLILCDEITSALDTVVAAAVIELLKELQRELGL 476
            RHR P E SGGQ+QR+  ARAL   P+LIL DE TSALD  V   V+ELL+ LQ +  L
Sbjct: 417 SRHRYPHEFSGGQRQRIAIARALVLKPRLILLDEPTSALDRTVQRQVVELLRSLQTKYNL 476

Query: 477 SYIFISHDLSLVEAICDEIVVMYGGKKVEDITPAKI-NAPHHPYSQLLFSS 526
           +Y+FISHDL++V+A+  +++V+  G+ VE    A+I  AP H Y++ L  +
Sbjct: 477 TYLFISHDLAVVKALSHQLMVVKHGQVVEQGDAAEIFAAPQHGYTRQLLEA 527



 Score =  154 bits (389), Expect = 8e-42
 Identities = 96/247 (38%), Positives = 145/247 (58%), Gaps = 15/247 (6%)

Query: 299 RAVEDVSLKVEKGRNLGIIGESGCGKSTLARAIAGILPAAV-----GKIVFDGKELGRSA 353
           R V +VS  +++G  + ++GESG GKS  A +I  +LP  +     G I + G++L  + 
Sbjct: 24  RVVNNVSFDIKRGETIALVGESGSGKSVTAHSILRLLPYPLARHPSGTINYAGQDL-LTL 82

Query: 354 RERTRDQLREMQI--VFQYADTALNPAKSVEDILDRPLVFYHGMNARARSLRIDELLDMV 411
           +E+T   +R  +I  +FQ   T+LNP  S+E  ++  L  + G+  +  + R  ELLD+V
Sbjct: 83  KEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGLHKGLQGKVATQRTLELLDLV 142

Query: 412 RLPRNLRHRR----PGELSGGQKQRVNFARALAADPKLILCDEITSALDTVVAAAVIELL 467
            +P    H+R    P ELSGGQ+QRV  A ALA +P+L++ DE T+ALD  V   ++ELL
Sbjct: 143 GIPEP--HKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELL 200

Query: 468 KELQRELGLSYIFISHDLSLVEAICDEIVVMYGGKKVEDITPAKI-NAPHHPYSQLLFSS 526
           KELQ  LG++ + ISHDL+LV  I   + VM  G  VE      +  +P HPY+Q L ++
Sbjct: 201 KELQARLGMALLLISHDLNLVRRIAHRVCVMQKGCIVEQADCETLFQSPQHPYTQELLAA 260

Query: 527 VPKLDPS 533
            P   P+
Sbjct: 261 EPSGGPA 267