Pairwise Alignments

Query, 551 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  343 bits (879), Expect = 1e-98
 Identities = 204/531 (38%), Positives = 318/531 (59%), Gaps = 19/531 (3%)

Query: 4   LVEIRDLKVEATTDTGRRVEIIKGVSLDVAEGEIVALIGESGSGKTTIALTLMGYARPGC 63
           +++ R + V    + G  V+ +K VS  +  GE VA++GESGSGK+  A T+MG      
Sbjct: 25  VIDARKVAVSFKVENGT-VQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSKRA 83

Query: 64  RISGGS-VLVAGNDLVTLTEKQRAKVRGTEVTYVPQSAAAAFNPAATIMDQVIEVTRIHG 122
            I+  + +   G D++  ++++R  +RG  ++ + Q   ++ NP  TI  Q+IE  R H 
Sbjct: 84  TIAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHR 143

Query: 123 LMAAAEARARAVELFRALSLPEPETIGSRYPHQVSGGQLQRLSAAMALISDPKLVIFDEP 182
            ++   A  RA+EL R + +P+PE   ++YPHQ+SGGQ QR+  AMAL +DP ++I DEP
Sbjct: 144 RVSRRAAAERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEP 203

Query: 183 TTALDVTTQIEVLRAFKSVMKKGGIAGVYVSHDLAVVAQIADHIVVLKGGEVQEVGTTEE 242
           TTALDVT Q ++L   + + ++ G+A + ++HDL VV Q +D++ V++ GEV+E  TTE 
Sbjct: 204 TTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTTEA 263

Query: 243 ILSSAKHPYTRELLSAFEPKPREAADAAERAP--APLL------KIENLVAGYGASKTDG 294
           + +  +H YTR LLS+      E + +A   P  AP+L      ++   +   G  + + 
Sbjct: 264 LFADPQHAYTRRLLSS------EPSGSANPLPDDAPILLDGRNVRVSFTLKKGGFFRPEF 317

Query: 295 LPLVRAVEDVSLKVEKGRNLGIIGESGCGKSTLARAIAGILPAAVGKIVFDGKELGRSAR 354
             LV AV+ +SL + +   LG++GESG GK+T  +A+  +L    G+I F+G+ +    R
Sbjct: 318 KELV-AVDGLSLNLRRHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKDR 376

Query: 355 ERTRDQLREMQIVFQYADTALNPAKSVEDILDRPLVFY-HGMNARARSLRIDELLDMVRL 413
           +  R    ++QIVFQ   ++LNP  SV  I++  L+    G N + R  R+++ L    +
Sbjct: 377 KGMRPLRSKIQIVFQDPFSSLNPRMSVGQIIEEGLIVNGMGENRKDRLKRVEDALVSAGM 436

Query: 414 PRNLRHRRPGELSGGQKQRVNFARALAADPKLILCDEITSALDTVVAAAVIELLKELQRE 473
           P N+  R P E SGGQ+QR+  ARA+A +P+ IL DE TSALD  V A +IELL+ LQ E
Sbjct: 437 PSNILSRFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIELLRRLQDE 496

Query: 474 LGLSYIFISHDLSLVEAICDEIVVMYGGKKVEDITPAKI-NAPHHPYSQLL 523
            GLSY+ ISHDL +V A+C  +VVM  GK VE+   +++ N P   Y++ L
Sbjct: 497 RGLSYLVISHDLKVVRALCHRVVVMQDGKIVEEGPVSEVLNNPKTAYTERL 547



 Score =  127 bits (320), Expect = 9e-34
 Identities = 77/262 (29%), Positives = 140/262 (53%), Gaps = 13/262 (4%)

Query: 4   LVEIRDLKVEATTDTG-------RRVEIIKGVSLDVAEGEIVALIGESGSGKTTIALTLM 56
           L++ R+++V  T   G       + +  + G+SL++   E + L+GESGSGKTT    L+
Sbjct: 295 LLDGRNVRVSFTLKKGGFFRPEFKELVAVDGLSLNLRRHETLGLVGESGSGKTTFGQALI 354

Query: 57  GYARPGCRISGGSVLVAGNDLVTLTEKQRAKVRGTEVTYVPQSAAAAFNPAATIMDQVIE 116
                     GG +   G  +     K    +R +++  V Q   ++ NP  ++   + E
Sbjct: 355 RLLNT----DGGEIYFEGEPIHDKDRKGMRPLR-SKIQIVFQDPFSSLNPRMSVGQIIEE 409

Query: 117 VTRIHGLMAAAEARARAVELFRALSLPEPETIGSRYPHQVSGGQLQRLSAAMALISDPKL 176
              ++G+    + R + VE    +S   P  I SR+PH+ SGGQ QR++ A A+  +P+ 
Sbjct: 410 GLIVNGMGENRKDRLKRVE-DALVSAGMPSNILSRFPHEFSGGQRQRIAIARAVALEPEF 468

Query: 177 VIFDEPTTALDVTTQIEVLRAFKSVMKKGGIAGVYVSHDLAVVAQIADHIVVLKGGEVQE 236
           ++ DEPT+ALD++ Q +++   + +  + G++ + +SHDL VV  +   +VV++ G++ E
Sbjct: 469 ILLDEPTSALDLSVQAQIIELLRRLQDERGLSYLVISHDLKVVRALCHRVVVMQDGKIVE 528

Query: 237 VGTTEEILSSAKHPYTRELLSA 258
            G   E+L++ K  YT  L+ A
Sbjct: 529 EGPVSEVLNNPKTAYTERLVKA 550