Pairwise Alignments

Query, 551 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 623 a.a., Dipeptide transport ATP-binding protein DppD in protein degradation cluster from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  324 bits (831), Expect = 5e-93
 Identities = 199/550 (36%), Positives = 309/550 (56%), Gaps = 37/550 (6%)

Query: 19  GRRVEIIKGVSLDVAEGEIVALIGESGSGKTTIALTLMGYA-RPGCRISGGSVLVA--GN 75
           G++V+ ++ VSL +  GE +A++GESGSGK+  AL LM    + G  +  G +L+     
Sbjct: 26  GQQVDAVRNVSLRLKRGETLAIVGESGSGKSVTALALMRLIEQSGANVRCGEMLLRRRNR 85

Query: 76  DLVTLTEK---QRAKVRGTEVTYVPQSAAAAFNPAATIMDQVIEVTRIHGLMAAAEARAR 132
            ++ L+E+   Q  +VRG ++  + Q    + NP  T+ +Q+ E  R+H   +  EA A 
Sbjct: 86  QVIELSEQSDAQMRRVRGADIAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASHEEALAE 145

Query: 133 AVELFRALSLPEPETIGSRYPHQVSGGQLQRLSAAMALISDPKLVIFDEPTTALDVTTQI 192
           A  +   + +PE + I SRYPHQ+SGG  QR+  AMAL   P ++I DEPTTALDVT Q 
Sbjct: 146 AKRMLDQVRIPESQAILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQA 205

Query: 193 EVLRAFKSVMKKGGIAGVYVSHDLAVVAQIADHIVVLKGGEVQEVGTTEEILSSAKHPYT 252
           ++L+  K + ++  +  ++++HD+ VVA IAD ++V+  GE  E G+ E+I  +  HPYT
Sbjct: 206 QILQLIKVLQQEMSMGVIFITHDMGVVADIADRVLVMYQGEAVETGSVEQIFHAPTHPYT 265

Query: 253 RELLSAF--------EPKPREAADAAERAPA---------------PLLKIENLVAGYGA 289
           + LL+A            PR     +   PA               P+L++  LV  +  
Sbjct: 266 QTLLAAVPQLGAMRGHSLPRRFPLISADEPALYESQIEQDTVVEGEPILQVRGLVTRFPL 325

Query: 290 SKTDGL-----PLVRAVEDVSLKVEKGRNLGIIGESGCGKSTLARAIAGILPAAVGKIVF 344
               GL       V AVE++S  +  G  L ++GESG GKST  RA+  ++ +  G+I+F
Sbjct: 326 RS--GLFNRVTREVHAVENISFDLWPGETLSLVGESGSGKSTTGRALLRLVESRQGEIIF 383

Query: 345 DGKELGRSARERTRDQLREMQIVFQYADTALNPAKSVEDILDRPLVFYHGMNARARSLRI 404
           +G+ +   +  + +   R++Q +FQ    +L+P ++V   +  PL  +      A + R+
Sbjct: 384 NGQRIDTLSAGKLQPLRRDIQCIFQDPYASLDPRQTVGYSIMEPLRIHGLGQGDAAAKRV 443

Query: 405 DELLDMVRLPRNLRHRRPGELSGGQKQRVNFARALAADPKLILCDEITSALDTVVAAAVI 464
             LL+ V L      R P E SGGQ+QR+  ARALA +PK+I+ DE  SALD  V   +I
Sbjct: 444 AWLLERVGLRPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSVRGQII 503

Query: 465 ELLKELQRELGLSYIFISHDLSLVEAICDEIVVMYGGKKVE-DITPAKINAPHHPYSQLL 523
            LL +LQRE+G++Y+FISHD+++VE I   + VMY G+ VE     A    P HPY++ L
Sbjct: 504 NLLLDLQREMGIAYLFISHDMAVVERISHRVAVMYLGQIVEMGPRRAVFENPQHPYTRKL 563

Query: 524 FSSVPKLDPS 533
            ++VP  DPS
Sbjct: 564 MAAVPVADPS 573