Pairwise Alignments

Query, 551 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 511 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  327 bits (839), Expect = 5e-94
 Identities = 201/508 (39%), Positives = 303/508 (59%), Gaps = 13/508 (2%)

Query: 25  IKGVSLDVAEGEIVALIGESGSGKTTIALTLMGYARPGCRISGGSVLVAGNDLVTLTEKQ 84
           +KG+ +DV +GE +A++GESGSGK+   + +MG       I G S    G++L+ L   +
Sbjct: 4   VKGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLLASNGIIEG-SAKYRGHELIGLPVNE 62

Query: 85  RAKVRGTEVTYVPQSAAAAFNPAATIMDQVIEVTRIHGLMAAAEARARAVELFRALSLPE 144
              +RG ++T + Q    + +P   I  Q+ E    H   +  +ARAR +EL + + +PE
Sbjct: 63  LNDIRGAKITMIFQEPMTSLDPLYRIGAQIAEPIIYHRGGSKRQARARVLELLKLVGIPE 122

Query: 145 PETIGSRYPHQVSGGQLQRLSAAMALISDPKLVIFDEPTTALDVTTQIEVLRAFKSVMKK 204
           PE     YPH++SGGQ QR+  AMAL ++P ++I DEPTTALDVT Q ++L   KS+ ++
Sbjct: 123 PERRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQQR 182

Query: 205 GGIAGVYVSHDLAVVAQIADHIVVLKGGEVQEVGTTEEILSSAKHPYTRELLSAFEPKPR 264
            G+A V ++HDL VV   A+ + V++ GE+ E GTTE+I    +  YT+ LL A EP   
Sbjct: 183 FGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDIFERPQADYTKMLLDA-EPSGH 241

Query: 265 EAADAAERAPAPL----LKIENLVAGYGASKTDGLPLVRAVEDVSLKVEKGRNLGIIGES 320
           + A  +E AP  L    + I+  + G   SK+      RAV+ V++ + +G+ +GI+GES
Sbjct: 242 KPAVGSE-APVVLSGKNVTIDYKIPGGFLSKSSKF---RAVDSVNVDLHQGQTIGIVGES 297

Query: 321 GCGKSTLARAIAGILPAAVGKIVFDGKELGRSARERTRDQLREMQIVFQYADTALNPAKS 380
           G GKSTL RA+  ++  + G+I F   E+    R+  R   R +Q+VFQ    +L+P ++
Sbjct: 298 GSGKSTLGRALLRLI-VSEGRIFFGKTEITGLDRKAMRPLRRHLQLVFQDPYGSLSPRQT 356

Query: 381 VEDILDRPLVFYHGMNARA-RSLRIDELLDMVRLPRNLRHRRPGELSGGQKQRVNFARAL 439
           V +I+   L  +    +RA R  R  E L  V L    R+R P E SGGQ+QR+  ARA+
Sbjct: 357 VGEIITEGLFVHEQQLSRAERDKRAIEALKEVGLDPAARNRYPHEFSGGQRQRIAIARAI 416

Query: 440 AADPKLILCDEITSALDTVVAAAVIELLKELQRELGLSYIFISHDLSLVEAICDEIVVMY 499
              P++++ DE TSALD  V   VI+LL++LQ+  GLSYIFISHDLS+++AI D ++VM 
Sbjct: 417 ILKPEVVILDEPTSALDRSVQGQVIDLLRDLQKAHGLSYIFISHDLSVIKAISDYVIVMR 476

Query: 500 GGKKVED-ITPAKINAPHHPYSQLLFSS 526
            GK VE+  T A  + P   Y++ L  S
Sbjct: 477 NGKIVEEGETDAIFSRPTAEYTKTLIKS 504



 Score =  132 bits (332), Expect = 3e-35
 Identities = 80/238 (33%), Positives = 131/238 (55%), Gaps = 7/238 (2%)

Query: 298 VRAVEDVSLKVEKGRNLGIIGESGCGKSTLARAIAGILPA---AVGKIVFDGKEL-GRSA 353
           + AV+ + + V++G  L ++GESG GKS     I G+L +     G   + G EL G   
Sbjct: 1   MNAVKGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLLASNGIIEGSAKYRGHELIGLPV 60

Query: 354 RERTRDQLREMQIVFQYADTALNPAKSVEDILDRPLVFYHGMNARARSLRIDELLDMVRL 413
            E    +  ++ ++FQ   T+L+P   +   +  P++++ G + R    R+ ELL +V +
Sbjct: 61  NELNDIRGAKITMIFQEPMTSLDPLYRIGAQIAEPIIYHRGGSKRQARARVLELLKLVGI 120

Query: 414 PRNLRH--RRPGELSGGQKQRVNFARALAADPKLILCDEITSALDTVVAAAVIELLKELQ 471
           P   R     P ELSGGQ+QRV  A ALA +P +++ DE T+ALD  + A +++LLK LQ
Sbjct: 121 PEPERRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQ 180

Query: 472 RELGLSYIFISHDLSLVEAICDEIVVMYGGKKVEDITPAKI-NAPHHPYSQLLFSSVP 528
           +  G++ + I+HDL +V    + + VM  G+ VE  T   I   P   Y+++L  + P
Sbjct: 181 QRFGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDIFERPQADYTKMLLDAEP 238