Pairwise Alignments

Query, 287 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 271 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  140 bits (353), Expect = 3e-38
 Identities = 86/264 (32%), Positives = 136/264 (51%), Gaps = 6/264 (2%)

Query: 27  MVGLSIILCWALVAIFAPLIIPYPVGEIVDLDYFGPMSRDFWLGSDYLGRDMLSRILMGA 86
           ++G  +I    ++A+ A +  PY    I       P S   WLG+D  GRD+ SR + GA
Sbjct: 9   LIGGVLIAVLLVLAVVAAVWTPYNPLAIDLRSKLQPPSMAHWLGTDEFGRDVASRAMQGA 68

Query: 87  RYTVGISLAAVTIACFSGVVLGMIAAVAGGWLDTLLSRLLDALNSIPSKLFGLVVVAAVG 146
             +  ++L  VT+A   G+V+G++A    GW D +L    D L + P  L  L V+  VG
Sbjct: 69  ATSCLVALLTVTLATAIGLVVGVVAGFVRGWTDRVLMAFNDTLLAFPGLLLALGVMVIVG 128

Query: 147 SSIPVLILTLSVIYIPGAYRFARALAVNINAMDFITVARIRGESTLYLIRSEILPNIIGP 206
           ++   ++L LS+ Y P   R  R   +++   +++  +R+ G S LY +   ILPN + P
Sbjct: 129 ANKWGIVLALSMAYAPSVVRVVRGTVLSLREREYVEASRMIGNSELYTMWRHILPNCVAP 188

Query: 207 VLADLGIRFVFIVLLLSGLSFLGLGVQPPYADWGALVRENIGGLPFGAPAV---IFPSFA 263
           V       F +++L  S LSFLGLGV PP   WG ++       P+ A AV   + P   
Sbjct: 189 VAVLATSMFGWVLLSESALSFLGLGVPPPAPTWGNML---ASARPYMASAVWLCVVPGLC 245

Query: 264 IASLTISVNLLIDNLPQKIRDRSE 287
           IA   + +NLL ++L  ++  R+E
Sbjct: 246 IALTLLGINLLGESLRDRLDPRTE 269