Pairwise Alignments

Query, 287 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  144 bits (363), Expect = 2e-39
 Identities = 82/258 (31%), Positives = 138/258 (53%), Gaps = 2/258 (0%)

Query: 23  NIVGMVGLSIILCWALVAIFAPLIIPY-PV-GEIVDLDYFGPMSRDFWLGSDYLGRDMLS 80
           N + ++GL II+    VA+FA ++ P+ PV G++ +     P +  + LG+D  GRD+LS
Sbjct: 42  NRLALLGLVIIIALLFVALFADVLAPHNPVQGDLRNARLLPPGTAGYLLGTDDQGRDILS 101

Query: 81  RILMGARYTVGISLAAVTIACFSGVVLGMIAAVAGGWLDTLLSRLLDALNSIPSKLFGLV 140
           R++ G+R T+ + L    IA   G+++G ++  AGGW+D +L R+ D   + P  +  L 
Sbjct: 102 RLIHGSRLTLFVVLLVAIIAAPIGLIVGTVSGYAGGWVDAILMRITDIFLAFPKLVLALA 161

Query: 141 VVAAVGSSIPVLILTLSVIYIPGAYRFARALAVNINAMDFITVARIRGESTLYLIRSEIL 200
           +VAA+G  I   +L ++V   P   R ARA  +     DFI   ++ G S   ++   ++
Sbjct: 162 LVAALGPGIENAVLAIAVTSWPPYARIARAETMTFRNSDFIAAVKLMGASPFRIVLKHVM 221

Query: 201 PNIIGPVLADLGIRFVFIVLLLSGLSFLGLGVQPPYADWGALVRENIGGLPFGAPAVIFP 260
           P  +  ++  + +    I+L  +GL FLGLG QPP  +WGA++      +         P
Sbjct: 222 PLCLSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMIASGRRFILDQWWVAAMP 281

Query: 261 SFAIASLTISVNLLIDNL 278
             AI  +++  NLL D L
Sbjct: 282 GIAILIVSLGFNLLGDGL 299