Pairwise Alignments

Query, 316 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

 Score =  198 bits (504), Expect = 1e-55
 Identities = 106/312 (33%), Positives = 173/312 (55%)

Query: 5   VLSLVLSRLLIAVITLVIVSFAVFFATTLLPGDTASILLGQAATPEAVEGLRKAMHLDEP 64
           +L  +L +L +AV TL+++S  VF    L+PGD A ++LG  A P+++  +R  + LD  
Sbjct: 1   MLRFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDMADPQSLADMRHTLGLDHS 60

Query: 65  AIFRFLRWIVGLLQGDLGTSYANEMPVKDLIGGRFVNTLQLAGVTALFSVPIALTLGITS 124
            + +FL W   +L  DLG S + +  V  LI  RF  +  +  V  LF+  IA+ +G+ +
Sbjct: 61  LVTQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLIA 120

Query: 125 AMLRGSPYDRIVTVLTIGVISVPEFMIATSAVLVFAVYLKWLPALSFANEVTSMTDLLRV 184
           A  + S  D  +  +   ++S+P F +    +  F + L WLP + + +   +    +  
Sbjct: 121 AWKQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSFSQAPWQAMSY 180

Query: 185 YAMPVITLTFVISAQMIRMTRAAVIETLNTPYVEMALLKGASRSRMVFRHALPNALGPIV 244
             +PV+TLT V    + RM RA+ IE L   Y+  A  KG S   ++++HALPNA  P  
Sbjct: 181 MVLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFAPTW 240

Query: 245 NAVALSLSYLLGGVIIVETIFNYPGIAKLMVDAVSTRDLPLIQSCAMVFCLGYLLLITTA 304
             V L L  LLGG+ ++ET+F  PGI +LMVDA+  RD P++Q C ++    Y+L+    
Sbjct: 241 TLVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVNLCV 300

Query: 305 DIIAILSNPRLR 316
           D++  L +PR++
Sbjct: 301 DLLYPLFDPRVK 312