Pairwise Alignments

Query, 316 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 317 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  184 bits (467), Expect = 2e-51
 Identities = 105/316 (33%), Positives = 165/316 (52%)

Query: 1   MNNRVLSLVLSRLLIAVITLVIVSFAVFFATTLLPGDTASILLGQAATPEAVEGLRKAMH 60
           M   +   + SR    ++ L IV+  VF  T    GD  S+LLG  AT   +  ++K   
Sbjct: 1   MKKSLFRYIASRAAGMLVVLAIVAVLVFVLTRAASGDPVSVLLGDQATAADIARVQKEYG 60

Query: 61  LDEPAIFRFLRWIVGLLQGDLGTSYANEMPVKDLIGGRFVNTLQLAGVTALFSVPIALTL 120
           LD+P   +F  W+  +LQG+LGTS   + PV   +  R   T  LA +    +  I +  
Sbjct: 61  LDKPLPVQFGYWLREVLQGNLGTSIFLQRPVTQALWERSEPTTLLALMAVAIAALIGVPC 120

Query: 121 GITSAMLRGSPYDRIVTVLTIGVISVPEFMIATSAVLVFAVYLKWLPALSFANEVTSMTD 180
           GI SA+ RG   D++ T + +   S+P F +    + +FAV   W P   +        +
Sbjct: 121 GIVSAVFRGRVVDQLFTGIAMLGASIPSFWLGIVLIQIFAVSFGWFPVSGYGAPDAPFAE 180

Query: 181 LLRVYAMPVITLTFVISAQMIRMTRAAVIETLNTPYVEMALLKGASRSRMVFRHALPNAL 240
            L    +P   L  + SA +IR TRA++++ L   YV  A  KG S S +V +HAL NAL
Sbjct: 181 RLHSLVLPATVLGLLNSALIIRFTRASMLDVLGEDYVRTARSKGLSESVVVLKHALRNAL 240

Query: 241 GPIVNAVALSLSYLLGGVIIVETIFNYPGIAKLMVDAVSTRDLPLIQSCAMVFCLGYLLL 300
            PIV  + L+++ ++GG +I ET+F  PG+  L+V AV  RD P+IQ   +V    Y+L+
Sbjct: 241 VPIVTVIGLTVALMIGGAVITETVFGLPGVGNLVVSAVLRRDYPVIQGALLVIAAIYVLI 300

Query: 301 ITTADIIAILSNPRLR 316
             + D++  + +PR++
Sbjct: 301 NFSIDLLYAVVDPRVK 316