Pairwise Alignments

Query, 316 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 316 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  190 bits (482), Expect = 4e-53
 Identities = 108/312 (34%), Positives = 175/312 (56%), Gaps = 1/312 (0%)

Query: 6   LSLVLSRLLIAVI-TLVIVSFAVFFATTLLPGDTASILLGQAATPEAVEGLRKAMHLDEP 64
           +SL L + L  +I TL+  S  VF    +LPG+ A +L+G  A+PEAV  L   + LD+P
Sbjct: 1   MSLFLFKRLATLIGTLIGASVIVFLVLEILPGNAAQMLMGPDASPEAVAALATKLGLDQP 60

Query: 65  AIFRFLRWIVGLLQGDLGTSYANEMPVKDLIGGRFVNTLQLAGVTALFSVPIALTLGITS 124
           A  R+  WI GLL G+LG SYA   PV DLI  R   T+ LA +   F+  IAL +G+T+
Sbjct: 61  AWTRYWHWIGGLLTGNLGDSYAYSSPVLDLILERLALTMPLALLAMFFTTVIALLVGVTA 120

Query: 125 AMLRGSPYDRIVTVLTIGVISVPEFMIATSAVLVFAVYLKWLPALSFANEVTSMTDLLRV 184
           A       D  +  +    I++P F  A   +LVF+V L+W  A  F          ++ 
Sbjct: 121 AARHNKLGDVGLMGMAQVGIAIPNFWFAILLILVFSVKLQWFSAGGFEGWGDGFFSGIKS 180

Query: 185 YAMPVITLTFVISAQMIRMTRAAVIETLNTPYVEMALLKGASRSRMVFRHALPNALGPIV 244
             +P ++L  V +A + R+TR+AV+E +   +V  A  KG S+  +++ H L NA+ P++
Sbjct: 181 LLLPALSLAVVQAAILARITRSAVLEVMREDFVRTARAKGVSQRMVLWTHVLRNAMIPVI 240

Query: 245 NAVALSLSYLLGGVIIVETIFNYPGIAKLMVDAVSTRDLPLIQSCAMVFCLGYLLLITTA 304
             + +  S LL G I+VE +F  PG+ +L+  A+S RDL ++++C M+     +++    
Sbjct: 241 TVMGMQFSELLAGTIVVENVFYLPGLGRLIFQAISNRDLIVVRNCVMLLAAMVVIVNFVV 300

Query: 305 DIIAILSNPRLR 316
           D++  + +PR++
Sbjct: 301 DVLYAVIDPRIK 312