Pairwise Alignments

Query, 316 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Dickeya dadantii 3937

 Score =  166 bits (419), Expect = 1e-45
 Identities = 97/336 (28%), Positives = 170/336 (50%), Gaps = 24/336 (7%)

Query: 5   VLSLVLSRLLIAVITLVIVSFAVFFATTLLPGDTASILLGQAA-TPEAVEGLRKAMHLDE 63
           +L  +L RL + + T + ++   F    L+PGD   I+ G+   +PE    L   + LD+
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHLIPGDPVMIMAGERGISPERHAQLMAELGLDK 60

Query: 64  PAIFRFLRWIVGLLQGDLGTSYANEMPVKDLIGGRFVNTLQLAGVTALFSVPIALTLGIT 123
           P   ++L +I G+L GDLG S  + +PV D    RF  TL+L     +F+V + + +G+ 
Sbjct: 61  PLWEQYLHYINGVLHGDLGMSLKSRIPVWDEFVPRFKATLELGVCAMIFAVIVGIPVGVL 120

Query: 124 SAMLRGSPYDRIVTVLTIGVISVPEFMIATSAVLVFAVYLKWLPALSFANEVTSMTDLLR 183
           +A+ RGS +D     + +   S+P F      +++ +V L   P      +   + D L 
Sbjct: 121 AAVKRGSVFDHTAVSIALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRVGDTVFLDDSLP 180

Query: 184 VYA-----------------------MPVITLTFVISAQMIRMTRAAVIETLNTPYVEMA 220
           +                         +P + L  +  A ++RMTR+A++E L   Y+  A
Sbjct: 181 LTGFMLIDTLIWGAEGDFKDAVMHMLLPAVVLGTIPLAVIVRMTRSAMLEVLGEDYIRTA 240

Query: 221 LLKGASRSRMVFRHALPNALGPIVNAVALSLSYLLGGVIIVETIFNYPGIAKLMVDAVST 280
             KG  R R++  HAL NA+ P+V  + L +  +L G I+ ETIF++PG+ + ++DA+  
Sbjct: 241 RAKGLGRLRVIVVHALRNAMLPVVTVIGLQVGTMLAGAILTETIFSWPGLGRWLIDALQR 300

Query: 281 RDLPLIQSCAMVFCLGYLLLITTADIIAILSNPRLR 316
           RD P++QS  ++     +L+    D++  + NPR+R
Sbjct: 301 RDYPVVQSGVLLVATMIILVNLLVDVLYGVVNPRIR 336