Pairwise Alignments

Query, 316 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 323 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  295 bits (756), Expect = 8e-85
 Identities = 144/308 (46%), Positives = 212/308 (68%)

Query: 8   LVLSRLLIAVITLVIVSFAVFFATTLLPGDTASILLGQAATPEAVEGLRKAMHLDEPAIF 67
           +V  RL + + TL+ +S  +F A  LLPGD A  +LGQ+ATPE V   R+ + LD+P  +
Sbjct: 12  MVAVRLGLGLFTLLFISLLIFLAVGLLPGDIAQQVLGQSATPETVAAFRRELGLDQPLSW 71

Query: 68  RFLRWIVGLLQGDLGTSYANEMPVKDLIGGRFVNTLQLAGVTALFSVPIALTLGITSAML 127
           R+L WI G+L GD G S AN  PV +L+  R  NTL LA   A  ++P+A+ LG+ +AM 
Sbjct: 72  RYLTWIGGILTGDFGHSLANGRPVAELLSARLGNTLFLAAYAAAIAIPLAVLLGLLAAMW 131

Query: 128 RGSPYDRIVTVLTIGVISVPEFMIATSAVLVFAVYLKWLPALSFANEVTSMTDLLRVYAM 187
           RG+ +DR++ V+T+  IS PEF +A   +   +V++ W P+++       + D+LR   +
Sbjct: 132 RGTWFDRVINVMTLSAISFPEFFVAYILMFWLSVHMGWFPSVADPGAAPDLFDMLRRAFL 191

Query: 188 PVITLTFVISAQMIRMTRAAVIETLNTPYVEMALLKGASRSRMVFRHALPNALGPIVNAV 247
           P ITL  V++A M+RMTRAAV+  L  PYV MA LKGASR R++ RHALPNAL PI N +
Sbjct: 192 PAITLVLVVTAHMMRMTRAAVLNVLAEPYVIMARLKGASRWRIITRHALPNALAPISNVI 251

Query: 248 ALSLSYLLGGVIIVETIFNYPGIAKLMVDAVSTRDLPLIQSCAMVFCLGYLLLITTADII 307
           A+++++L+ GV+IVE +F YPG+ +LMVD+V+ RD+P++Q+CA++F   Y+LL   AD++
Sbjct: 252 AINVAWLITGVVIVEVVFVYPGLGQLMVDSVTNRDMPVVQACALIFAAVYILLNLLADVL 311

Query: 308 AILSNPRL 315
           AI +NPRL
Sbjct: 312 AIATNPRL 319