Pairwise Alignments

Query, 536 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 97.8 bits (242), Expect = 9e-25
 Identities = 121/519 (23%), Positives = 224/519 (43%), Gaps = 55/519 (10%)

Query: 50  AGNAVAATPVSGGTLRAAGWSASTADTLDPAKASLSTDYVRCC-SFYNRLAFLDKGGTP- 107
           A   +A  P++         S ++    DP++ +  TD+     + +NRL    +GGT  
Sbjct: 12  AAGLLACMPLAQAASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRLTQFKRGGTEV 71

Query: 108 QMELAEAIE-TKDAKTWTVKLRKGVTFHDG------KPLAADDVIFSLKRHLD------- 153
           +  LA + + ++D  T+T  LR GV FH        +   ADDV+F+  R LD       
Sbjct: 72  EPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLLDAQSPFRQ 131

Query: 154 --PSVGSKVAKIAAQMTGFKAVDK---QTVEITLASPNADLPTILSM---------HHFM 199
             PS       +    T  K+VDK    TV   L + +A     L+M         +   
Sbjct: 132 AYPSESPYFTDMGLNTT-IKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASVQSAEYAAQ 190

Query: 200 IVADGTTDF--SKGNGTGAFVREVFEPGVRSVGIKNKNYWK-SGPNVDSFEYFAISDDSS 256
           ++  G  +    K  GTG FV + ++   +   + NK YWK     +D+  +    D +S
Sbjct: 191 LLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNLVFAITPDAAS 250

Query: 257 RVNALLSGDIHLAATINPRSMRLVESQGAGFVLSKTTSGNYTNLNMRLDMEPGSKRDFVE 316
           R+  L +G+  ++    P  + +++      VL +    N   L   +   P  +    +
Sbjct: 251 RLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQA-GFNLGFLAYNVTHPPLDQLKVRQ 309

Query: 317 GMKYLVNREQIVKSALRGLGEVGNDQPVSPANFYHNPDLKPRAFDPEKAKFHFEKAGML- 375
            +   +++  I+K+  +  G++  +  + PA + ++P +K   +DP KAK   ++AG+  
Sbjct: 310 ALDMAIDKPAIIKAVYQSAGQLAQNA-LPPAQWSYDPTIKDAPYDPTKAKALLKEAGVAP 368

Query: 376 GQSI---PVVASDAANSAVDM-AMIIQASAAEIGLKLDVQRVPADGYWDNYWLKA----- 426
           G ++    +    A+N    M A +IQ    ++G+K ++        W  Y  +A     
Sbjct: 369 GTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANI----VSYEWGEYIKRAKNGEH 424

Query: 427 -PVHFGNINPRPTPDILFSLLYSSEA--PWNESQYKSEKFDKMLIEARGSLDQERRKAIY 483
             + +G       PD    +LYS  A    N +++ +  +DK++ +A+ S D+E+R   Y
Sbjct: 425 DAMIYGWTGDNGDPDNWLGVLYSCAAVKGSNYAKWCNPAYDKLVQQAKVSNDREQRIKWY 484

Query: 484 NEMQVMVASEAGTIIPAYISNV-DAITAKLKGLEANPLG 521
            + Q  +  E   I P   S V   +  ++K  + +P G
Sbjct: 485 QQAQ-KILKEQVPITPIANSTVFQPLRKEVKDFKISPFG 522