Pairwise Alignments

Query, 536 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 521 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  117 bits (294), Expect = 8e-31
 Identities = 131/514 (25%), Positives = 220/514 (42%), Gaps = 63/514 (12%)

Query: 53  AVAATPVSGGTLRAAGWSASTADTLDPAKASLSTDYVRCCSFYNRLAFLDKGGTPQMELA 112
           A+ AT VS      +   A    ++DP   + + D      F++ +     GG  +  LA
Sbjct: 11  ALLATGVSASAQTLSIGFADPVSSVDPELNNHAGDRSLALHFWDSIINSRDGGKLEPALA 70

Query: 113 EAIETKDAKTWTVKLRKGVTFHDGKPLAADDVIFSLKRHLDPSVGSKVAKIAAQMTGFKA 172
            + +  D KTW  KLR  + + DG P +ADD++FS +R    +V   VA  +  +   ++
Sbjct: 71  SSWKALDDKTWEFKLRTDIKWQDGTPFSADDIVFSFQR--SRNVPGSVASYSGALRTVES 128

Query: 173 V---DKQTVEITLASPNADLPTILSMHHFMIVADG----TTDFSKGN---GTGAFVREVF 222
           V   D  T+ +   +PN  LP  ++  + +    G    T D++ G    GTG +    +
Sbjct: 129 VTAKDPATLIVKTNTPNPMLPLEIASIYIVSKHVGEKSKTEDYNAGRAVVGTGPYKFVSY 188

Query: 223 EPGVRSVGIKNKNYWKSGPNVDSFEYFAISDDSSRVNALLSGDIHLAATINPRSMRLVES 282
            PG R+V  +N  Y+   P  +   Y  I++ ++R  ALL+GD+ +   +    +  +  
Sbjct: 189 VPGDRTVFERNPGYYGPKPLWEKVNYRFINNGAARTAALLAGDVDVIDKVAVTDVEKLRK 248

Query: 283 QGAGFVLSKTTSGNYTNLNMRLDMEPGSK---RDFV-------------------EGMKY 320
                   K +   Y  L + L ++P  K    +F+                   + +  
Sbjct: 249 D------PKVSVYTYPGLRVLL-LQPTFKAGPNEFITDNAGKPLEKNPLLDVRVRQALSL 301

Query: 321 LVNREQIVKSALRGLGEVGNDQPVSPANFYHNPDLKPRAFDPEKAKFHFEKAGM-LGQSI 379
            +NR+ IV   L+G     N Q +   +F +NPD+K  A++ E+AK    +AG   G  I
Sbjct: 302 AINRKAIVDRVLQGTVTEAN-QWMPKGSFGYNPDVKDIAYNAEQAKKLLAEAGFPQGFQI 360

Query: 380 PV-VASDAANSAVDMAMIIQASAAEIGLKLDVQRVPADGYW----DNYWLKAPVHFGNIN 434
            + V  D    A +    +    + IG+K  V+ VP   Y      N +  + + +GN  
Sbjct: 361 AIHVPGDRYPQAPETVQAVAQFWSRIGVKTKVEVVPWAVYSGRANKNEYAVSVIAWGN-- 418

Query: 435 PRPTPDILFSLLYSSEAP--------WNESQYKSEKFDKMLIEARGSLDQERRKAIYNEM 486
              T +  + LL +   P         N  +Y +E  DK L  A    D +RR+AI+   
Sbjct: 419 --GTGEAGYGLLQTLTTPDAKRGRGSNNWGRYSNESVDKALDAATVEFDAKRREAIFRHA 476

Query: 487 QVMVASEAGTIIPAYISNVDAITAKLKGLEANPL 520
             +V  + G  IP Y  +   I A  KGL+  PL
Sbjct: 477 AKLVTDDVGQ-IPLY--HYQNIWAAKKGLKVVPL 507