Pairwise Alignments

Query, 536 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 504 a.a., peptide ABC transporter from Sinorhizobium meliloti 1021

 Score =  120 bits (301), Expect = 1e-31
 Identities = 120/495 (24%), Positives = 230/495 (46%), Gaps = 28/495 (5%)

Query: 47  LGRAGNAVAATPVSGGTLRAAGWSA----STADTLDPAKASLSTDYVRCCSFYNRLAFLD 102
           +GRA  A AA  +S G   AAG  +      + T DP K++ + D     + ++ L  +D
Sbjct: 8   IGRAAFA-AALMLSAGYAEAAGILSIGRREDSTTFDPIKSAQNVDNWVFSNVFDVLVRVD 66

Query: 103 KGGTP-QMELAEAIE-TKDAKTWTVKLRKGVTFHDGKPLAADDVIFSLKRHLDPSVGSKV 160
           K GT  +  LAE+   + D  T+T K+R    F DG P+ A+D  FSL R  D   GS  
Sbjct: 67  KTGTKLEPGLAESWTLSDDGLTYTFKIRDA-KFSDGSPITAEDAAFSLLRIRDHE-GSLW 124

Query: 161 AKIAAQMTGFKAVDKQTVEITLASPNADLPTILSMHHFMIVADGTTDFSKGN-------G 213
           +     +   +A D +T+ + L +P+A   + L++ +  +++    +  +          
Sbjct: 125 SDSYKIIETAEAADPKTLVVKLKTPSAPFLSTLALPNVSVLSKKAVEAGEDAFAELPTAS 184

Query: 214 TGAFVREVFEPGVRSVGIKNKNYWKSGP-NVDSFEYFAISDDSSRVNALLSGDIHLAATI 272
           +GAF  + +  G R +  KN N+W++    +D  E+ ++ DD++R+  + +G +  A  +
Sbjct: 185 SGAFTVKEWRRGDRVILEKNPNFWQADRVKLDGVEWISVPDDNTRMLNVQAGQLDTAIFV 244

Query: 273 N-PRSMRLVESQGAGFVLSKTTSGNYTNLNMRLDMEPGSKRDFVEGMKYLVNREQIVKSA 331
              R   L +       +  +T  ++  +N    M   +K++  + +   ++++ IV + 
Sbjct: 245 PFSRVEELKKDPNLTVHIDTSTREDHLLINHEHGML--AKKEVRQALDMAIDKKAIVDTV 302

Query: 332 LRGLGEVGNDQPVSPANFYHNPDLKPRAFDPEKAKFHFEKAGMLGQSIPVVASDAANSAV 391
             G+G V N   +   + YH        +DPEKAK    +AG    ++  V +       
Sbjct: 303 TFGIGTVANSY-IPKGSLYHYDANYQYPYDPEKAKAMLAEAGASDLTLNYVVNAGNEVDE 361

Query: 392 DMAMIIQASAAEIGLKLDVQRVPADGYWD-----NYWLKAPVHFGNINPRPTPDILFSLL 446
            +A+++Q   A+ G+ +++Q+V A   WD     +Y +   +++ N    P     F L 
Sbjct: 362 QIAVLLQQQFAKAGVTVNLQKVDASQSWDMLVAGDYDISV-MYWTNDVLDPDQKTTFVLG 420

Query: 447 YSSEAPWNESQYKSEKFDKMLIEARGSLDQERRKAIYNEMQVMVASEAGTIIPAYISNVD 506
           + +   +  ++Y SEK  +++  AR  LD  +R+A+Y ++Q     +   I   Y   ++
Sbjct: 421 HDTNMNY-MTRYNSEKVKELVAAARLELDPAKREAMYVDIQKTAKDDVHWIDLYYSPYLN 479

Query: 507 AITAKLKGLEANPLG 521
                ++    NPLG
Sbjct: 480 VSRKNIENFYQNPLG 494