Pairwise Alignments

Query, 536 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 520 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  102 bits (255), Expect = 3e-26
 Identities = 121/490 (24%), Positives = 200/490 (40%), Gaps = 56/490 (11%)

Query: 47  LGRAGNAVAATPVSGGTLRAAGWSASTADTLDPAKASLSTDYVRCCSFYNRLAFLDKGGT 106
           LG A   +    +SG        +A    +LDP     S         Y  L   D    
Sbjct: 5   LGLAATMLMGLTLSGHAETLKWGAARDIYSLDPYSYGDSYTLSFLNHVYEGLVRYDANLK 64

Query: 107 PQMELAEAIETKDAKTWTVKLRKGVTFHDGKPLAADDVIFSLKRHLDPSVGSKVAKIAAQ 166
            +  LAE+ ET     W   LRKGV FHDG    ADDV+ SLKR  DP     V+ +   
Sbjct: 65  IEPALAESWETVSDTVWRFHLRKGVKFHDGAEFTADDVLASLKRVSDP-----VSPLRGN 119

Query: 167 MTGFKA---VDKQTVEITLASPNADLPTILSMHHFMIVADGTTDFSK------------- 210
           +  +K+   VD  T++I L+ P   L   L+  H        T+ S+             
Sbjct: 120 LPAYKSSKKVDDHTIDIELSGPYPLLLNDLTNIHVFDAGWLKTNNSEKPTDVGAKIEGYA 179

Query: 211 ---GNGTGAFVREVFEPGVRSVGIKNKNYW--KSGPNVDSFEYFAISDDSSRVNALLSGD 265
               NGTG F  E   P  ++V +KN ++W   S  NVD  E+  I+  ++RV ALLSG+
Sbjct: 180 TYHTNGTGPFKLESRVPDSKTVLVKNPDWWDKTSKSNVDRIEFTPITSAATRVAALLSGE 239

Query: 266 IHLAATINPRSMRLVESQGAGFVLSKTTSGN-YTNLNMRLDMEPGSKRDF-----VEGMK 319
           ++       + +  +++Q    V+ +T         N + ++  GS+  F      +   
Sbjct: 240 VNFTENAPSQDLPRLQAQPDLKVMERTDLRTVMVGFNRKPELANGSENKFNDLRVRQAFA 299

Query: 320 YLVNREQIVKSALRGLGEVGNDQPVSPANFYHNPDLKPR-AFDPEKAKFHFEKAGMLGQS 378
           + ++R+ I +  +RG         V+P    + P+L    AFDP  +K    +AG     
Sbjct: 300 HALDRDLIQQRVMRGKSRTAG-AVVAPEIPGYAPELDTTLAFDPALSKKLLAEAGASDYP 358

Query: 379 IPVV-ASDAANSAVDMAMIIQASAAEIGLKLDVQRVP--------ADGYWDNY---WLKA 426
             +V  +DA  +  ++   +    +  G K  +   P          G  D Y   W   
Sbjct: 359 FTLVCTTDAYVNEEELCQGLVNLLSRAGFKPQLDIAPTAAQAPKRTSGKSDVYLIGWATE 418

Query: 427 PVHFGNINPRPTPDILFSLLYSSEA---PWNESQYKSEKFDKMLIEARGSLDQERRKAIY 483
           P+         +  IL  ++ +  A    +N   +   + DK++++A   +D+ +R A+ 
Sbjct: 419 PM-------LDSYSILLQMIQTKTANAGVFNWGGWSYPEIDKLIVQASTEMDRTKRLALQ 471

Query: 484 NEMQVMVASE 493
           ++   MV  E
Sbjct: 472 SKALQMVKDE 481