Pairwise Alignments

Query, 536 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 529 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score =  275 bits (702), Expect = 4e-78
 Identities = 184/540 (34%), Positives = 284/540 (52%), Gaps = 19/540 (3%)

Query: 5   ITNWTRSDDAMVETAIRRGATRRELLQMMLAGGAALSAGSLVLGRAGNAVAATPVSGGTL 64
           +T +T+  D ++  A   G  RR  L    A G A   GS +    G A A  P  GG L
Sbjct: 1   MTEFTKRPDGLIVPA---GINRRGFLAGTAALGLAAGIGSSI--GLGEARAQEPKRGGHL 55

Query: 65  RAAGWSASTADTLDPAKASLSTDYVRCCSFYNRLAFLD-KGGTPQMELAEAIETK-DAKT 122
           +      +T D+LDPA  S S  +V    + + L     + G P   +A + E+  DA  
Sbjct: 56  KLGLDGGATTDSLDPASYSGSVSFVIGHLWGDTLVESHPETGAPLPAIASSWESSADASV 115

Query: 123 WTVKLRKGVTFHDGKPLAADDVIFSLKRHLDPSVGSKVAKIAAQMTGFKAVDKQTVEI-- 180
           WT K+R  + FHDGK L   DVI +LKRH D   GSK   +   M   K ++++  ++  
Sbjct: 116 WTFKVRNDIAFHDGKKLTVADVIATLKRHSDE--GSKSGALGL-MRSVKTIEEKAGDLVL 172

Query: 181 TLASPNADLPTILSMHHFMIVADGTTDFSKGN-GTGAFVREVFEPGVRSVGIKNKNYWKS 239
           TL   NADLP +L+ +H +I   G  D      GTG +    +E G+R+   KN   W+S
Sbjct: 173 TLTEGNADLPLLLTDYHLIIQPGGGGDNPASPIGTGPYKLASYEAGIRATFEKNTADWRS 232

Query: 240 GPN-VDSFEYFAISDDSSRVNALLSGDIHLAATINPRSMRLVESQGAGFVLSKTTSGNYT 298
               VDS E   ++D+++R+ AL SG +H    ++P+++ L++      +L  +  G Y+
Sbjct: 233 DRGYVDSVEIIVMNDNTARIAALSSGQVHFINGVDPKTVPLLKRAPRVEILQTSGKGFYS 292

Query: 299 NLNMRLDMEPGSKRDFVEGMKYLVNREQIVKSALRGLGEVGNDQPVSPANFYHNPDLKPR 358
            L M  D  P    D    +KY ++R+ I+   L G G +GND PV+         ++ R
Sbjct: 293 FL-MHCDTAPFDNNDLRLALKYAIDRQAILDRVLGGYGTLGNDYPVNENYALAPEGIEQR 351

Query: 359 AFDPEKAKFHFEKAGMLGQSIPVVASDAA-NSAVDMAMIIQASAAEIGLKLDVQRVPADG 417
           A+DP+KA FH++K+G   + I +  SDAA   AVD +++ Q SA + G++++V+R P DG
Sbjct: 352 AYDPDKAAFHYKKSGH-DRPILLRTSDAAFPGAVDASVLFQESARKAGIEIEVRREPEDG 410

Query: 418 YWDNYWLKAPVHFGNINPRPTPDILFSLLYSSEAPWNESQYKSEKFDKMLIEARGSLDQE 477
           YW N W   P        RPT D  +S  Y S A WN++++K   FDK+L++AR  LD+ 
Sbjct: 411 YWTNVWNVQPFCPSYWGGRPTQDSRYSTSYLSSAEWNDTRFKRGDFDKLLLQARSELDEA 470

Query: 478 RRKAIYNEMQVMVASEAGTIIPAYISNVDAITAKLKGLEANPLGGQMGYAF-AEYVWLEA 536
           +RK +Y+ M +MV  E G I+P +   V+A +A LKG   + +G  +   +    VW ++
Sbjct: 471 KRKELYHTMALMVRDEGGLILPVFNDYVNAASASLKGF-VHDIGNDLSNGYVGSRVWFDS 529