Pairwise Alignments

Query, 536 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score = 97.1 bits (240), Expect = 1e-24
 Identities = 105/357 (29%), Positives = 162/357 (45%), Gaps = 28/357 (7%)

Query: 76  TLDPAKASLSTDYVRCCSFYNRLAFLDKGGTP----QMELAEAIETKD-AKTWTVKLRKG 130
           +LDP +ASL  D       +N L     G +     + +LAE  E+ D  K WT  LRKG
Sbjct: 47  SLDPHRASLVGDKGIVAEMFNALVRFPPGSSDPAALEADLAERWESSDDKKVWTFFLRKG 106

Query: 131 VTFHDG-KPLAADDVIFSLKRHLDPSVGSKVAKIAAQMTGFKAVDKQTVEITLASPN-AD 188
           V FH G   L A DV++SL+R  DP   S  A   A +   +A+D  TV++TL  P+ A 
Sbjct: 107 VMFHGGYGELKAADVVYSLQRAADPKRSSFSANFTA-LEKVEALDDYTVKVTLKYPDTAF 165

Query: 189 LPTILSMHHFMIVADGTTD--------FSKGNGTGAFVREVFEPGVRSVGIKNKNYWKSG 240
           L  + + H   IV+    +           G G  AF   + +  V+ V   N  Y++  
Sbjct: 166 LGRVSNYHGGQIVSKAAAEKLGERYGQAPIGTGPFAFSEHITQQYVKLVA--NDQYFRGK 223

Query: 241 PNVDSFEYFAISDDSSRVNALLSGDIHLAATINPRSMRLVE-SQGAGFVLSKTTSGNYTN 299
           P + +  Y  I  DS+R  A  S ++ L   +  R  R VE S+  G  +       +  
Sbjct: 224 PKLGAIVYRMIPSDSARELAFASDELDL--MLGKREQRWVERSRARGVNVDVFEPAEFRT 281

Query: 300 LNMRLDMEPGSKRDFVEGMKYLVNREQIVKSALRGLGEVGNDQPVSPANFYHNPDLK--P 357
           L +  +++P       + +   VN  +I++ A + + + G    + P N Y   D    P
Sbjct: 282 LFLNRNIKPLDDVKVRQAIAASVNINEIIRYAGKDVADGGCS--IIP-NGYQGLDCSAGP 338

Query: 358 RAFDPEKAKFHFEKAGM-LGQSIPVVASDAANSAVDMAMIIQASAAEIGLKLDVQRV 413
            A+DP  AK     AG   G  +  V S+AA   + +  IIQA  A+ G+ L+++ V
Sbjct: 339 YAYDPAHAKALLASAGYPNGLKLKSVVSNAA-PQLPIMEIIQAQLAKAGITLEMEVV 394