Pairwise Alignments

Query, 536 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  103 bits (256), Expect = 2e-26
 Identities = 125/530 (23%), Positives = 226/530 (42%), Gaps = 66/530 (12%)

Query: 43  GSLVLGRAGNAVAATPVSGGTLRAAGWSASTADTLDPAKASLSTDYVRCC-SFYNRLAFL 101
           G+ +L  A +AVAA+ +          S  +    DP + +  TD+     + +NRL   
Sbjct: 12  GAGLLSGAPSAVAASNL-------VFCSEGSPAGFDPGQYTTGTDFDASAETVFNRLTQF 64

Query: 102 DKGGTPQME-LAEAIETKD-AKTWTVKLRKGVTFHD------GKPLAADDVIFSLKRHLD 153
           ++GGT  +  LA   E  D  KT+T  LR+GV FH        +P  ADDV+F+  R LD
Sbjct: 65  ERGGTAVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNRMLD 124

Query: 154 PSVGSKVAK-----------IAAQMTGFKAVDKQTVEITLASPNADLPTILSMHHFMIVA 202
                + A            +   +   + +D+ TV+ TL   +A     L+M    I +
Sbjct: 125 KDNPFRKAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFASIQS 184

Query: 203 DGTTDFSKGNG-----------TGAFVREVFEPGVRSVGIKNKNYWK-SGPNVDSFEYFA 250
               D    NG           TG FV   ++   +     NK+YW+     +D+  +  
Sbjct: 185 AEYADQLLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLIFAI 244

Query: 251 ISDDSSRVNALLSGDIHLAATINPRSMRLVES-------QGAGFVLSKTTSGNYTNLNMR 303
            +D S R+  L   +  +     P  +  +++       Q AGF L          +   
Sbjct: 245 TTDASVRMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDKIKGS 304

Query: 304 LDMEPGSKRDFVEGMKYLVNREQIVKSALRGLGEVG-NDQPVSPANFYHNPDLKPRAFDP 362
            +  P ++    + +   V++++I++S  +G G++  N  P  P  + ++  +K  AFDP
Sbjct: 305 NEANPMAQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMP--PTQWSYDDSIKDAAFDP 362

Query: 363 EKAKFHFEKAGML-GQSIPVVASDAAN----SAVDMAMIIQASAAEIGLKLDVQRVPADG 417
           EKAK   ++AG+  G  I + A         +A  MA ++Q+  A+IG+K  +       
Sbjct: 363 EKAKQLLKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKI----VSY 418

Query: 418 YWDNYWLKA------PVHFGNINPRPTPDILFSLLYSSEA--PWNESQYKSEKFDKMLIE 469
            W  Y  ++       +  G       PD     LY  +A    N S++  + +D ++ +
Sbjct: 419 EWGEYIKRSKGGEQGAMLIGWSGDNGDPDNWLGTLYGCDAVDGNNFSKWCYKPYDDLIKQ 478

Query: 470 ARGSLDQERRKAIYNEMQVMVASEAGTIIPAYISNVDAITAKLKGLEANP 519
           A+ + DQ +R  +Y + Q ++  +      A+ +    ++AK+K  + +P
Sbjct: 479 AKATSDQAKRTELYQKAQHILKEQVPITPIAHSTVYQPMSAKVKDFKISP 528